RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	CCDC144A	A2RUR9	1427 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	PRAG1	Q86YV5	1406 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	ASXL1	Q8IXJ9	1541 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	GABRD	O14764	452 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	SUV39H1	O43463	412 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	EIF3J	O75822	258 aa	Known RBP	5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	SNUPN	O95149	360 aa	Known RBP	5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	PCDH8	O95206	1070 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	APEX1	P27695	318 aa	Known RBP	5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	NEK2	P51955	445 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	ITGA1	P56199	1179 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	ALDH6A1	Q02252	535 aa	Known RBP	5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	MAP3K12	Q12852	859 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	CT83	Q5H943	113 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	CNKSR3	Q6P9H4	555 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	TRMT10B	Q6PF06	316 aa	Known RBP	5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	OTOP2	Q7RTS6	562 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	CXorf67	Q86X51	503 aa	Predicted RBP	5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	TMEFF1	Q8IYR6	380 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	KY	Q8NBH2	561 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	CHMP4C	Q96CF2	233 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	PWWP2A	Q96N64	755 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	NOX5	Q96PH1	765 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	BTBD2	Q9BX70	525 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	OR10A5	Q9H207	317 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	SYNPO2	Q9UMS6	1093 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	USP18	Q9UMW8	372 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	ROBO1	Q9Y6N7	1651 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	MET	P08581	1390 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	NALCN	Q8IZF0	1738 aa		5.14	□□□□□ -1.59
LRRC28-222	ENST00000561431	NRXN1	Q9ULB1	1477 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	AKAP8	O43823	692 aa	Known RBP	5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	TOM1	O60784	492 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	PRL	P01236	227 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	ADCY8	P40145	1251 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	EPHB1	P54762	984 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	BCAR1	P56945	870 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	PDCD1	Q15116	288 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	KIAA1841	Q6NSI8	718 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	PROSER1	Q86XN7	944 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	FAM129C	Q86XR2	697 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	EAF2	Q96CJ1	260 aa	Predicted RBP	5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	FAXDC2	Q96IV6	333 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	AMN	Q9BXJ7	453 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	QRSL1	Q9H0R6	528 aa	Known RBP	5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	SEMA4A	Q9H3S1	761 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	L2HGDH	Q9H9P8	463 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	ZBTB21	Q9ULJ3	1066 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	NCOA3	Q9Y6Q9	1424 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	MYOM2	P54296	1465 aa		5.13	□□□□□ -1.59
LRRC28-222	ENST00000561431	PRSS38	A1L453	326 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	KLHL33	A6NCF5	533 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	PRICKLE3	O43900	615 aa	Predicted RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	MAP4K4	O95819	1239 aa	Predicted RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	MPIG6B	O95866	241 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	LPL	P06858	475 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	MTHFD2	P13995	350 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	ENPP1	P22413	925 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	XPA	P23025	273 aa	Predicted RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	IGFBP6	P24592	240 aa	Predicted RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	HSPA1L	P34931	641 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	MANF	P55145	182 aa	Known RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	ERVK-21	P61565	698 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	NFATC3	Q12968	1075 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	MYBPC3	Q14896	1274 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	RTP5	Q14D33	572 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	FSCN1	Q16658	493 aa	Known RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	TOR2A	Q5JU69	321 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	LINC01356	Q8N9X3	169 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	TP53I13	Q8NBR0	393 aa	Predicted RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	LMBR1	Q8WVP7	490 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	HOOK2	Q96ED9	719 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	NOL10	Q9BSC4	688 aa	Known RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	MTG2	Q9H4K7	406 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	FTSJ1	Q9UET6	329 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	INVS	Q9Y283	1065 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	LUC7L2	Q9Y383	392 aa	Known RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	PPP2R3B	Q9Y5P8	575 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	TNKS	O95271	1327 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	ANKRD30B	Q9BXX2	1392 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	PIK3C2G	O75747	1445 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	PTCH1	Q13635	1447 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	FAM135B	Q49AJ0	1406 aa		5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	MED1	Q15648	1581 aa	Predicted RBP	5.12	□□□□□ -1.59
LRRC28-222	ENST00000561431	KNDC1	Q76NI1	1749 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431		H0Y858	1186 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431		K7ESF4	209 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	ELL2	O00472	640 aa	Predicted RBP	5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	H2AFY	O75367	372 aa	Known RBP	5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	RAB27A	P51159	221 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	LGALS4	P56470	323 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	IL13RA1	P78552	427 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	SRSF2	Q01130	221 aa	Known RBP	5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	CD83	Q01151	205 aa		5.11	□□□□□ -1.59

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