RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SFPQP23246 707 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 ACLYP53396 1101 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 CHMP4BP1P59074 171 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 MBTD1Q05BQ5 628 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 KCNH2Q12809 1159 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 BFSP1Q12934 665 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 TBX2Q13207 712 aaPredicted RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 PRPF4BQ13523 1007 aaKnown RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 SNRNP35Q16560 246 aaKnown RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 SLC9C1Q4G0N8 1177 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 FIGNQ5HY92 759 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 TCERG1LQ5VWI1 586 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 TSHZ1Q6ZSZ6 1077 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 CCDC186Q7Z3E2 898 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 RPAINQ86UA6 219 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 RSPH3Q86UC2 560 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 PPFIBP1Q86W92 1011 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 CCDC150Q8NCX0 1101 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 SLC35C1Q96A29 364 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 MFSD14AQ96MC6 490 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 GLT1D1Q96MS3 346 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 ACO2Q99798 780 aaKnown RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 FDXACB1Q9BRP7 624 aaPredicted RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 CBWD1Q9BRT8 395 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 GCOM2Q9BZD3 368 aaPredicted RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.39□□□□□ -0.915e-6■■■■■ 32.4
TRAF3-209ENST00000560463 IKZF4Q9H2S9 585 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 PCIF1Q9H4Z3 704 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 TSKSQ9UJT2 592 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 AGO2Q9UKV8 859 aaKnown RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 SCN5AQ14524 2016 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 KIAA0100Q14667 2235 aaKnown RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 CNTNAP2Q9UHC6 1331 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 SCN1AP35498 2009 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 MICAL3Q7RTP6 2002 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 A0A0B4J269 797 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 ZNF233A6NK53 670 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 TISP43B9A030 160 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 KBTBD13C9JR72 458 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 PMM2O15305 246 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 P4HA2O15460 535 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 NRDCO43847 1150 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 EXTL3O43909 919 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 N4BP1O75113 896 aaKnown RBP9.38□□□□□ -0.91
TRAF3-209ENST00000560463 GPR32O75388 356 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 GJB1P08034 283 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 PROZP22891 400 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 AXLP30530 894 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 MATR3P43243 847 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRAF3-209ENST00000560463 POU5F1Q01860 360 aaKnown RBP9.38□□□□□ -0.91
TRAF3-209ENST00000560463 NCBP1Q09161 790 aaKnown RBP9.38□□□□□ -0.91
TRAF3-209ENST00000560463 HIC1Q14526 733 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 KYAT1Q16773 422 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 ATF7IP2Q5U623 682 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 MPZL3Q6UWV2 235 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
TRAF3-209ENST00000560463 CNGA4Q8IV77 575 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 ZBTB10Q96DT7 871 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 CCDC51Q96ER9 411 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 SCLT1Q96NL6 688 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 MSTO1Q9BUK6 570 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 TARS2Q9BW92 718 aaKnown RBP9.38□□□□□ -0.91
TRAF3-209ENST00000560463 EDEM3Q9BZQ6 932 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 PAK6Q9NQU5 681 aaPredicted RBP9.38□□□□□ -0.91
TRAF3-209ENST00000560463 TNFSF13BQ9Y275 285 aa9.38□□□□□ -0.91
TRAF3-209ENST00000560463 A0A1W2PQJ5 194 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 M0QZ92 97 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 OGTO15294 1046 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 ERLIN2O94905 339 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 EDN1P05305 212 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 EIF4BP23588 611 aaKnown RBP9.37□□□□□ -0.91
TRAF3-209ENST00000560463 GTF2H1P32780 548 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 FMO5P49326 533 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 VAMP7P51809 220 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 CRYBB1P53674 252 aaPredicted RBP9.37□□□□□ -0.91
TRAF3-209ENST00000560463 MCL1Q07820 350 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 CYP24A1Q07973 514 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 CETN1Q12798 172 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 ITGA7Q13683 1181 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 NOLC1Q14978 699 aaKnown RBP eCLIP9.37□□□□□ -0.91
TRAF3-209ENST00000560463 SYCP1Q15431 976 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 SURF1Q15526 300 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 PKN2Q16513 984 aaKnown RBP9.37□□□□□ -0.91
TRAF3-209ENST00000560463 TMEM132AQ24JP5 1023 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 DCAF17Q5H9S7 520 aaPredicted RBP9.37□□□□□ -0.91
TRAF3-209ENST00000560463 FAM47CQ5HY64 1035 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 GBP6Q6ZN66 633 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 RUFY4Q6ZNE9 571 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 CTU1Q7Z7A3 348 aaKnown RBP9.37□□□□□ -0.91
TRAF3-209ENST00000560463 SERINC5Q86VE9 423 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 LRRC8AQ8IWT6 810 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 CCDC112Q8NEF3 446 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 PARD3BQ8TEW8 1205 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 SH3TC2Q8TF17 1288 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 DNAJB3Q8WWF6 145 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 SAAL1Q96ER3 474 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 PCMTD1Q96MG8 357 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms