RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 NCF2P19878 526 aaPredicted RBP14.32□□□□□ -0.12
TRAF3-208ENST00000560371 INPP1P49441 399 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 SEMA3FQ13275 785 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 PDIA5Q14554 519 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 EZH2Q15910 746 aaKnown RBP14.32□□□□□ -0.12
TRAF3-208ENST00000560371 WDR72Q3MJ13 1102 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 SBK1Q52WX2 424 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 GAS2L3Q86XJ1 694 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 TRPV6Q9H1D0 765 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 SARS2Q9NP81 518 aaKnown RBP14.32□□□□□ -0.12
TRAF3-208ENST00000560371 CAPN7Q9Y6W3 813 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 PRRG1O14668 218 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 ARL4CP56559 192 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 CDK17Q00537 523 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 CUL1Q13616 776 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 DHX35Q9H5Z1 703 aaKnown RBP14.32□□□□□ -0.12
TRAF3-208ENST00000560371 ZC3H13Q5T200 1668 aaKnown RBP14.32□□□□□ -0.12
TRAF3-208ENST00000560371 ZNF746Q6NUN9 644 aaPredicted RBP14.32□□□□□ -0.12
TRAF3-208ENST00000560371 C16orf86Q6ZW13 317 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 SCFD2Q8WU76 684 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 TMEM143Q96AN5 459 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 EIF3BP55884 814 aaKnown RBP14.32□□□□□ -0.12
TRAF3-208ENST00000560371 CDR2Q01850 454 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 TMEM62Q0P6H9 643 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 ZNF564Q8TBZ8 553 aaPredicted RBP14.32□□□□□ -0.12
TRAF3-208ENST00000560371 SEPT8Q92599 483 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 NSUN2Q08J23 767 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAF3-208ENST00000560371 SLC15A2Q16348 729 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 SCG3Q8WXD2 468 aaKnown RBP14.31□□□□□ -0.12
TRAF3-208ENST00000560371 DIP2AQ14689 1571 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 PDHBP11177 359 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 LCP1P13796 627 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 PRAMEP78395 509 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 ATG16L1Q676U5 607 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 FAM117BQ6P1L5 589 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 LRRC53A6NM62 1247 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 CYBBP04839 570 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 HSD17B4P51659 736 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 CACNB2Q08289 660 aaPredicted RBP14.31□□□□□ -0.12
TRAF3-208ENST00000560371 DGKDQ16760 1214 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 C6orf118Q5T5N4 469 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 TADA2BQ86TJ2 420 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 TRPC7Q9HCX4 862 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 ERAP1Q9NZ08 941 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 ZC3H4Q9UPT8 1303 aaKnown RBP14.31□□□□□ -0.12
TRAF3-208ENST00000560371 GLB1LQ6UWU2 654 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 CLEC10AQ8IUN9 316 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 SNX19Q92543 992 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 BCAR1P56945 870 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 DCAF4L1Q3SXM0 396 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 CNTNAP4Q9C0A0 1308 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 RPS6KA5O75582 802 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 CLNS1AP54105 237 aaKnown RBP14.31□□□□□ -0.12
TRAF3-208ENST00000560371 RNF180Q86T96 592 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 RNF25Q96BH1 459 aaPredicted RBP14.31□□□□□ -0.12
TRAF3-208ENST00000560371 SAYSD1Q9NPB0 183 aa14.31□□□□□ -0.12
TRAF3-208ENST00000560371 USP42Q9H9J4 1324 aaKnown RBP14.3□□□□□ -0.12
TRAF3-208ENST00000560371 MAFGO15525 162 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 TMEM132DQ14C87 1099 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 OR6P1Q8NGX9 317 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 GLT1D1Q96MS3 346 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 PARVAQ9NVD7 372 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 TAP1Q03518 808 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 GFPT1Q06210 699 aaPredicted RBP14.3□□□□□ -0.12
TRAF3-208ENST00000560371 PDCD7Q8N8D1 485 aaKnown RBP14.3□□□□□ -0.12
TRAF3-208ENST00000560371 AGBL3Q8NEM8 1001 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 ITM2BQ9Y287 266 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 TRIM49P0CI25 452 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 TRIM49CP0CI26 452 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 ZFXP17010 805 aaPredicted RBP14.3□□□□□ -0.12
TRAF3-208ENST00000560371 ACOT2P49753 483 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 CPT1AP50416 773 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 NYAP2Q9P242 653 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 NR3C2P08235 984 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRAF3-208ENST00000560371 APPL2Q8NEU8 664 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 FER1L4A9Z1Z3 1794 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 GOLGA8MH3BSY2 632 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 KIF19Q2TAC6 998 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 FRMD5Q7Z6J6 570 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 TTC8Q8TAM2 541 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 CNOT10Q9H9A5 744 aaKnown RBP14.3□□□□□ -0.12
TRAF3-208ENST00000560371 TTC7AQ9ULT0 858 aaPredicted RBP14.3□□□□□ -0.12
TRAF3-208ENST00000560371 RIMBP3CA6NJZ7 1639 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 RIMBP3BA6NNM3 1639 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 RIMBP3Q9UFD9 1639 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 RBP5P82980 135 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 ADCY2Q08462 1091 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 TRIM68Q6AZZ1 485 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 CRLF3Q8IUI8 442 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 MAML1Q92585 1016 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 AGAP1Q9UPQ3 857 aa14.3□□□□□ -0.12
TRAF3-208ENST00000560371 MYO10Q9HD67 2058 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 SSTR3P32745 418 aaPredicted RBP14.29□□□□□ -0.12
TRAF3-208ENST00000560371 ULK4Q96C45 1275 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 EDEM3Q9BZQ6 932 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 KIAA0391O15091 583 aaKnown RBP14.29□□□□□ -0.12
TRAF3-208ENST00000560371 CSF1RP07333 972 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 ZNF235Q14590 738 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms