RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 GOLGA6BA6NDN3 693 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 MEFVO15553 781 aaPredicted RBP8.74□□□□□ -1.01
RTF1-205ENST00000558298 EFCAB14O75071 495 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 BAIAP3O94812 1187 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 PRPF6O94906 941 aaKnown RBP8.74□□□□□ -1.01
RTF1-205ENST00000558298 ZNF202O95125 648 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 IQCF3P0C7M6 154 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 CKBP12277 381 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 INSRRP14616 1297 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 SELPP16109 830 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 FECHP22830 423 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 QARSP47897 775 aaKnown RBP8.74□□□□□ -1.01
RTF1-205ENST00000558298 GUCY1B3Q02153 619 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 PRKCEQ02156 737 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 MGAT3Q09327 533 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 MBTPS1Q14703 1052 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 DPCR1Q3MIW9 517 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 TPRNQ4KMQ1 711 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 XKR3Q5GH77 459 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 FAM47CQ5HY64 1035 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 HAUS3Q68CZ6 603 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 EMBQ6PCB8 327 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 ZNF365Q70YC5 407 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 LRRC8DQ7L1W4 858 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 MIER3Q7Z3K6 550 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 TMEM139Q8IV31 216 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 EXOC8Q8IYI6 725 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 RPUSD2Q8IZ73 545 aaKnown RBP8.74□□□□□ -1.01
RTF1-205ENST00000558298 USP38Q8NB14 1042 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 MIEF2Q96C03 454 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 SCLYQ96I15 445 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 RSRC1Q96IZ7 334 aaKnown RBP8.74□□□□□ -1.01
RTF1-205ENST00000558298 RNPC3Q96LT9 517 aaKnown RBP8.74□□□□□ -1.01
RTF1-205ENST00000558298 GUCD1Q96NT3 240 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 SH3GL3Q99963 347 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 JPH2Q9BR39 696 aaPredicted RBP8.74□□□□□ -1.01
RTF1-205ENST00000558298 POLR3CQ9BUI4 534 aaPredicted RBP8.74□□□□□ -1.01
RTF1-205ENST00000558298 RAB34Q9BZG1 259 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 TMEM60Q9H2L4 133 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 TTYH1Q9H313 450 aaPredicted RBP8.74□□□□□ -1.01
RTF1-205ENST00000558298 ATP6V0A4Q9HBG4 840 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 TUFT1Q9NNX1 390 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 MTMR10Q9NXD2 777 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 PKD2L1Q9P0L9 805 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 GABBR1Q9UBS5 961 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 MCM8Q9UJA3 840 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 PCDHA7Q9UN72 937 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 NOD1Q9Y239 953 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 TRANK1O15050 2925 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 KLHL33A6NCF5 533 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 EML1O00423 815 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 BACH1O14867 736 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 LIN7AO14910 233 aaPredicted RBP8.73□□□□□ -1.01
RTF1-205ENST00000558298 TREHO43280 583 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 SORBS3O60504 671 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 DTNBO60941 627 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 C22orf31O95567 290 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 ACRP10323 421 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 RPA1P27694 616 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 TNFRSF8P28908 595 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 SYKP43405 635 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 CCL23P55773 120 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 CDC42EP1Q00587 391 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 SP4Q02446 784 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 PDCD2Q16342 344 aaPredicted RBP8.73□□□□□ -1.01
RTF1-205ENST00000558298 UGCGQ16739 394 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 TSR1Q2NL82 804 aaKnown RBP8.73□□□□□ -1.01
RTF1-205ENST00000558298 GLE1Q53GS7 698 aaKnown RBP8.73□□□□□ -1.01
RTF1-205ENST00000558298 CEP85LQ5SZL2 805 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 HYIQ5T013 277 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 SWSAP1Q6NVH7 229 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 MTHFD1LQ6UB35 978 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 CYP26C1Q6V0L0 522 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 Q7L0L9 218 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 RSPH3Q86UC2 560 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 BCAS4Q8TDM0 211 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 AK8Q96MA6 479 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 USP28Q96RU2 1077 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 WDR24Q96S15 920 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 LXNQ9BS40 222 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 GOLPH3LQ9H4A5 285 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 HAUS4Q9H6D7 363 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 ZSWIM4Q9H7M6 989 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 NRBP2Q9NSY0 501 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 ODF2LQ9ULJ1 636 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 TRPC6Q9Y210 931 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 PCDHB6Q9Y5E3 794 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 TTC3P53804 2025 aa8.73□□□□□ -1.01
RTF1-205ENST00000558298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 DDX39AO00148 427 aaKnown RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 NDUFAB1O14561 156 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 NBNO60934 754 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 SLITRK3O94933 977 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 IPO7O95373 1038 aaKnown RBP8.72□□□□□ -1.01
RTF1-205ENST00000558298 MARK3P27448 753 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 MCM7P33993 719 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 RFC5P40937 340 aa8.72□□□□□ -1.01
RTF1-205ENST00000558298 IRAK1P51617 712 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms