RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 NPTXRO95502 500 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 EDN1P05305 212 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 IDEP14735 1019 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 GAP43P17677 238 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 LONRF3Q496Y0 759 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 CLLU1OSQ5K130 101 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 NT5DC1Q5TFE4 455 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 ATF7IP2Q5U623 682 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 GLB1LQ6UWU2 654 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 TAS1R3Q7RTX0 852 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 HAUS6Q7Z4H7 955 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 SPRED2Q7Z698 418 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 FAM178BQ8IXR5 827 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 CEP57L1Q8IYX8 460 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 FSIP1Q8NA03 581 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 SLC17A8Q8NDX2 589 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 HELQQ8TDG4 1101 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 RSPH1Q8WYR4 309 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 MRPS27Q92552 414 aaKnown RBP14.94□□□□□ -0.02
SHMT2-228ENST00000557302 STAMQ92783 540 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 GUCD1Q96NT3 240 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 CASD1Q96PB1 797 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 ADPGKQ9BRR6 497 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 C17orf80Q9BSJ5 609 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 HPSEQ9Y251 543 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 USP20Q9Y2K6 914 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 RWDD3Q9Y3V2 267 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 IPPQ9Y573 584 aa14.94□□□□□ -0.02
SHMT2-228ENST00000557302 MRPL42Q9Y6G3 142 aaKnown RBP14.94□□□□□ -0.02
SHMT2-228ENST00000557302 FAM237AA0A1B0GTK4 181 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 GOLGA6L4A6NEF3 574 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 MEIS3P2A8K0S8 358 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 SLFN14P0C7P3 912 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 ITGA4P13612 1032 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 ABCD1P33897 745 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 DCAF4L1Q3SXM0 396 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 SPOUT1Q5T280 376 aaKnown RBP14.93□□□□□ -0.02
SHMT2-228ENST00000557302 APBB1IPQ7Z5R6 666 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-228ENST00000557302 SFR1Q86XK3 245 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 TMEM192Q8IY95 271 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 LRRC43Q8N309 656 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 SMG8Q8ND04 991 aaKnown RBP14.93□□□□□ -0.02
SHMT2-228ENST00000557302 KCNN1Q92952 543 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 CLP1Q92989 425 aaKnown RBP14.93□□□□□ -0.02
SHMT2-228ENST00000557302 CDX2Q99626 313 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-228ENST00000557302 TARS2Q9BW92 718 aaKnown RBP14.93□□□□□ -0.02
SHMT2-228ENST00000557302 MRPL9Q9BYD2 267 aaKnown RBP14.93□□□□□ -0.02
SHMT2-228ENST00000557302 TRIM9Q9C026 710 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 NXF3Q9H4D5 531 aaKnown RBP14.93□□□□□ -0.02
SHMT2-228ENST00000557302 RSAD1Q9HA92 442 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 UBN1Q9NPG3 1134 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 SEL1LQ9UBV2 794 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 USP25Q9UHP3 1055 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 CDH23Q9H251 3354 aa14.93□□□□□ -0.02
SHMT2-228ENST00000557302 MYO9BQ13459 2157 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 TCHHQ07283 1943 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 FRMD3A2A2Y4 597 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 ACTN4O43707 911 aaKnown RBP14.92□□□□□ -0.02
SHMT2-228ENST00000557302 NMT1P30419 496 aaKnown RBP14.92□□□□□ -0.02
SHMT2-228ENST00000557302 CTNNB1P35222 781 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 SYKP43405 635 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 NDUFA8P51970 172 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 ASIC1P78348 528 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 CSPP1Q1MSJ5 1256 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 EPC2Q52LR7 807 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 HERC4Q5GLZ8 1057 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-228ENST00000557302 EEF1DP3Q658K8 133 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 AGMOQ6ZNB7 445 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 CCDC65Q8IXS2 484 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 FBXO22Q8NEZ5 403 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 MYLIPQ8WY64 445 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 FIZ1Q96SL8 496 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 GAS2L1Q99501 681 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-228ENST00000557302 ACO2Q99798 780 aaKnown RBP14.92□□□□□ -0.02
SHMT2-228ENST00000557302 APOL6Q9BWW8 343 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 TYW1Q9NV66 732 aaKnown RBP14.92□□□□□ -0.02
SHMT2-228ENST00000557302 PANK4Q9NVE7 773 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 SERTAD1Q9UHV2 236 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 TNFSF13BQ9Y275 285 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 INPP5FQ9Y2H2 1132 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 HES2Q9Y543 173 aa14.92□□□□□ -0.02
SHMT2-228ENST00000557302 PRUNE2Q8WUY3 3088 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 MYH11P35749 1972 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 EPOPA6NHQ4 379 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 OFD1O75665 1012 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 LINC00271P0C7V0 271 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 BMPR1AP36894 532 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 GTF2BQ00403 316 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 ZNF568Q3ZCX4 644 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 NOMO2Q5JPE7 1267 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 CNNM4Q6P4Q7 775 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 ZPBP2Q6X784 338 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 URGCPQ8TCY9 931 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 BICD1Q96G01 975 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 IPO9Q96P70 1041 aaKnown RBP14.91□□□□□ -0.02
SHMT2-228ENST00000557302 C7orf25Q9BPX7 421 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 TCHPQ9BT92 498 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 GOLPH3LQ9H4A5 285 aa14.91□□□□□ -0.02
SHMT2-228ENST00000557302 ST6GALNAC4Q9H4F1 302 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms