RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 DKK3Q9UBP4 350 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 POLG2Q9UHN1 485 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 USTQ9Y2C2 406 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 A0A1W2PRQ8 180 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 TLDC2A0PJX2 215 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 STAM2O75886 525 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 NOL4O94818 638 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 ZBTB7AO95365 584 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 HOXD10P28358 340 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 GEMIN4P57678 1058 aaKnown RBP5.49□□□□□ -1.53
TMEM260-210ENST00000556422 ZNF280AP59817 542 aaPredicted RBP5.49□□□□□ -1.53
TMEM260-210ENST00000556422 FKBP3Q00688 224 aaKnown RBP5.49□□□□□ -1.53
TMEM260-210ENST00000556422 POU5F1BQ06416 359 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 ARHGAP29Q52LW3 1261 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 HERC4Q5GLZ8 1057 aaPredicted RBP5.49□□□□□ -1.53
TMEM260-210ENST00000556422 ZNF569Q5MCW4 686 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 NELFCDQ8IXH7 590 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 TMC2Q8TDI7 906 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 SLC5A5Q92911 643 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 EIF2AK1Q9BQI3 630 aaKnown RBP5.49□□□□□ -1.53
TMEM260-210ENST00000556422 NUP58Q9BVL2 599 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 BHMT2Q9H2M3 363 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 NHEJ1Q9H9Q4 299 aaPredicted RBP5.49□□□□□ -1.53
TMEM260-210ENST00000556422 TRPV5Q9NQA5 729 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 FAM207AQ9NSI2 230 aaPredicted RBP5.49□□□□□ -1.53
TMEM260-210ENST00000556422 HOXC10Q9NYD6 342 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 PCSK1NQ9UHG2 260 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 PAPPA2Q9BXP8 1791 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 CENPFP49454 3210 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 ZMYM2Q9UBW7 1377 aa5.49□□□□□ -1.53
TMEM260-210ENST00000556422 ATP8B1O43520 1251 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SLITRK3O94933 977 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 MYCP01106 439 aaPredicted RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ASNSP08243 561 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 PPM1FP49593 454 aaPredicted RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 HSD17B4P51659 736 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CLCN6P51797 869 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 HDAC4P56524 1084 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 TGFB2P61812 414 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CDK17Q00537 523 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 APBA1Q02410 837 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 PPP2R3AQ06190 1150 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CIAPIN1Q6FI81 312 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 DPY19L2P1Q6NXN4 242 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 LDHDQ86WU2 507 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SPATS2Q86XZ4 545 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 TRIM59Q8IWR1 403 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 VPS52Q8N1B4 723 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 GIMAP1Q8WWP7 306 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 NELL1Q92832 810 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SH3KBP1Q96B97 665 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 FIZ1Q96SL8 496 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 POLD4Q9HCU8 107 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 EMILIN3Q9NT22 766 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 FAM53CQ9NYF3 392 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SPO11Q9Y5K1 396 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SBF1O95248 1867 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 NFIBO00712 420 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 P4HA2O15460 535 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ARP10275 920 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 FERP16591 822 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ITGB5P18084 799 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 GHRHRQ02643 423 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 HGSNATQ68CP4 663 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 DSTYKQ6XUX3 929 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CAPN12Q6ZSI9 719 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 KRT26Q7Z3Y9 468 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SFR1Q86XK3 245 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 MSANTD4Q8NCY6 345 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CHURC1Q8WUH1 139 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CLEC4DQ8WXI8 215 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ASIC4Q96FT7 647 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 PURBQ96QR8 312 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ZNF341Q9BYN7 854 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 IKZF4Q9H2S9 585 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ACAD8Q9UKU7 415 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 TRAF3IP3Q9Y228 551 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 WDR37Q9Y2I8 494 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 DUSP10Q9Y6W6 482 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ASTN1O14525 1302 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 RPTORQ8N122 1335 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 A0A0B4J203 849 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 LRRC53A6NM62 1247 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 GCOM1H8Y6P7 765 aaPredicted RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 TRAF5O00463 557 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 TLR2O60603 784 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SKAP2O75563 359 aaPredicted RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ERLIN2O94905 339 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ICAM1P05362 532 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 POLR2MP0CAP2 368 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 MYBP10242 640 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 RPL17P18621 184 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CYP27A1Q02318 531 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CTTNQ14247 550 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CNGA3Q16281 694 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 ASTE1Q2TB18 679 aaPredicted RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 CEP55Q53EZ4 464 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 THOC7Q6I9Y2 204 aaKnown RBP5.48□□□□□ -1.53
TMEM260-210ENST00000556422 RINT1Q6NUQ1 792 aa5.48□□□□□ -1.53
TMEM260-210ENST00000556422 SLC30A9Q6PML9 568 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms