RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ZHX3Q9H4I2 956 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 RGL1Q9NZL6 768 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 SCOCQ9UIL1 159 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 DNAJC12Q9UKB3 198 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 COG5Q9UP83 839 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 NIP7Q9Y221 180 aaKnown RBP eCLIP8.34□□□□□ -1.07
CHD8-209ENST00000555935 LRCH1Q9Y2L9 728 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 C2CD2Q9Y426 696 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 POTEB3A0JP26 581 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 POTECB2RU33 542 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 ANKRD63C9JTQ0 380 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CDH16O75309 829 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 GH1P01241 217 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 PDHA1P08559 390 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 NOVP48745 357 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CACNB1Q02641 598 aaPredicted RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 DYNC1I2Q13409 638 aaKnown RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 MPP2Q14168 576 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 KIF22Q14807 665 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 NFIL3Q16649 462 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 ASPRV1Q53RT3 343 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 ARSHQ5FYA8 562 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 RHBDF2Q6PJF5 856 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 POTEBQ6S5H4 581 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 LONP2Q86WA8 852 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SLC13A5Q86YT5 568 aaPredicted RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 RIBC1Q8N443 379 aaPredicted RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 VTI1AQ96AJ9 217 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 DTNBP1Q96EV8 351 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 EYA3Q99504 573 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CCDC77Q9BR77 488 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 DDX23Q9BUQ8 820 aaKnown RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 TRIM4Q9C037 500 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 LRRC19Q9H756 370 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 TLE6Q9H808 572 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 AAASQ9NRG9 546 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SPATA31A1Q5TZJ5 1347 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SNED1Q8TER0 1413 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 WTIPA6NIX2 430 aaPredicted RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 NVLO15381 856 aaKnown RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 MTA2O94776 668 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 GM2AP17900 193 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 MAN1A1P33908 653 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 HOXD13P35453 343 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 PSMC2P35998 433 aaKnown RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 VHLP40337 213 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CLK2P49760 499 aaKnown RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 PPP4CP60510 307 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 GSTO1P78417 241 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 NR1H3Q13133 447 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SNX1Q13596 522 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 GIT2Q14161 759 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 C16orf86Q6ZW13 317 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 MAEAQ7L5Y9 396 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CADPS2Q86UW7 1296 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SESTD1Q86VW0 696 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SFR1Q86XK3 245 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 ZDHHC14Q8IZN3 488 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SLC44A5Q8NCS7 719 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 KRT35Q92764 455 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 KIFAP3Q92845 792 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 IFT43Q96FT9 208 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 BORCS6Q96GS4 357 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 ZNF333Q96JL9 665 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 MKNK1Q9BUB5 465 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 TBC1D10AQ9BXI6 508 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 MLXIPLQ9NP71 852 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CHKBQ9Y259 395 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 STK24Q9Y6E0 443 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 PHLPP1O60346 1717 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 ASTN1O14525 1302 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 FAM47DPA6NHR8 397 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SKIP12755 728 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 TARSP26639 723 aaKnown RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 TUBP50607 506 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SLC18A1P54219 525 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 EVA1CP58658 441 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 OCRLQ01968 901 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CUL3Q13618 768 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 MOGSQ13724 837 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 LAMB3Q13751 1172 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CTTNQ14247 550 aaKnown RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 STAT4Q14765 748 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SIX1Q15475 284 aaPredicted RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 AADACL2Q6P093 401 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SYT2Q8N9I0 419 aaPredicted RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 SLC17A8Q8NDX2 589 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SH3RF3Q8TEJ3 882 aaPredicted RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 COA7Q96BR5 231 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SLC7A6OSQ96CW6 309 aaPredicted RBP8.33□□□□□ -1.08
CHD8-209ENST00000555935 SNF8Q96H20 258 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 CRAMP1Q96RY5 1269 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 AGPAT1Q99943 283 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 UBA5Q9GZZ9 404 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 UBN1Q9NPG3 1134 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 SAR1AQ9NR31 198 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 DLGAP2Q9P1A6 1054 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 LNPEPQ9UIQ6 1025 aa8.33□□□□□ -1.08
CHD8-209ENST00000555935 HAO1Q9UJM8 370 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms