RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 KIF23Q02241 960 aaPredicted RBP4.4□□□□□ -1.7
KTN1-220ENST00000555172 FAPQ12884 760 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 KIF22Q14807 665 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 SMAD2Q15796 467 aaKnown RBP4.4□□□□□ -1.7
KTN1-220ENST00000555172 PKN2Q16513 984 aaKnown RBP4.4□□□□□ -1.7
KTN1-220ENST00000555172 DPP9Q86TI2 863 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 RPAINQ86UA6 219 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 GALNT13Q8IUC8 556 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 PPM1NQ8N819 430 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 FBXO15Q8NCQ5 510 aaPredicted RBP4.4□□□□□ -1.7
KTN1-220ENST00000555172 ASB11Q8WXH4 323 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 LRTOMTQ8WZ04 291 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 COPS5Q92905 334 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 ZNF622Q969S3 477 aaKnown RBP eCLIP4.4□□□□□ -1.79e-8■□□□□ 9.4
KTN1-220ENST00000555172 DNAJC28Q9NX36 388 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 ZSWIM5Q9P217 1185 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 LRFN1Q9P244 771 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 SNX13Q9Y5W8 968 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 SNX11Q9Y5W9 270 aa4.4□□□□□ -1.7
KTN1-220ENST00000555172 A0A1W2PPH5 198 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 POM121BA6NF01 834 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 TRIM64CA6NLI5 447 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 PRR33A8MZF0 331 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 TRIM38O00635 465 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 HMMRO75330 724 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 TMEM253P0C7T8 217 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 VAV1P15498 845 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 TSHRP16473 764 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 PDCP20941 246 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 STAT1P42224 750 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 CTSKP43235 329 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 ITGA8P53708 1063 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 PCBP3P57721 371 aaKnown RBP4.4□□□□□ -1.71
KTN1-220ENST00000555172 OCRLQ01968 901 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 ALDH6A1Q02252 535 aaKnown RBP4.4□□□□□ -1.71
KTN1-220ENST00000555172 ASIC2Q16515 512 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 TIGD6Q17RP2 521 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 KLHDC7AQ5VTJ3 777 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 EEF1DP3Q658K8 133 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 E4F1Q66K89 784 aaPredicted RBP4.4□□□□□ -1.71
KTN1-220ENST00000555172 IQCEQ6IPM2 695 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 USP45Q70EL2 814 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 LRRTM4Q86VH4 590 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 FERMT2Q96AC1 680 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 TCTN2Q96GX1 697 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 FCRL3Q96P31 734 aaPredicted RBP4.4□□□□□ -1.71
KTN1-220ENST00000555172 ALG1Q9BT22 464 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 PHF20Q9BVI0 1012 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 KATNAL1Q9BW62 490 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 NUP62CLQ9H1M0 184 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 CARS2Q9HA77 564 aaKnown RBP4.4□□□□□ -1.71
KTN1-220ENST00000555172 CD320Q9NPF0 282 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 GPRC5CQ9NQ84 441 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 GPR27Q9NS67 375 aa4.4□□□□□ -1.71
KTN1-220ENST00000555172 TRBV23OR9-2A0A075B6M9 112 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 ARVCFO00192 962 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 ETV2O00321 342 aaPredicted RBP4.39□□□□□ -1.71
KTN1-220ENST00000555172 ACKR2O00590 384 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 ADAMTS3O15072 1205 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 DOK2O60496 412 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 NDUFS2O75306 463 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 TADA3O75528 432 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 KRT37O76014 449 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 HNRNPCP07910 306 aaKnown RBP eCLIP4.39□□□□□ -1.71
KTN1-220ENST00000555172 GSTM1P09488 218 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 ENDOUP21128 410 aaKnown RBP4.39□□□□□ -1.71
KTN1-220ENST00000555172 MUTP22033 750 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 ACTN2P35609 894 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 LTBRP36941 435 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 TECP42680 631 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 ATXN1P54253 815 aaKnown RBP4.39□□□□□ -1.71
KTN1-220ENST00000555172 ADKP55263 362 aaKnown RBP4.39□□□□□ -1.71
KTN1-220ENST00000555172 GPR85P60893 370 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 KRT83P78385 493 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 KCNAB2Q13303 367 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 SPARCL1Q14515 664 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 KRT32Q14532 448 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 PGS1Q32NB8 556 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 PRR16Q569H4 304 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 HAUS3Q68CZ6 603 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 APOA5Q6Q788 366 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 NEK10Q6ZWH5 1172 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 CCDC33Q8N5R6 958 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 KREMEN2Q8NCW0 462 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 NPLOC4Q8TAT6 608 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.39□□□□□ -1.71
KTN1-220ENST00000555172 CNTD2Q9H8S5 307 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 DBNDD1Q9H9R9 158 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 GJB4Q9NTQ9 266 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 FEZ2Q9UHY8 353 aaPredicted RBP4.39□□□□□ -1.71
KTN1-220ENST00000555172 SYNPO2Q9UMS6 1093 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 TMEM98Q9Y2Y6 226 aa4.39□□□□□ -1.71
KTN1-220ENST00000555172 IPO5O00410 1097 aaKnown RBP4.38□□□□□ -1.71
KTN1-220ENST00000555172 CLGNO14967 610 aa4.38□□□□□ -1.71
KTN1-220ENST00000555172 MSCO60682 206 aa4.38□□□□□ -1.71
KTN1-220ENST00000555172 DDX58O95786 925 aaKnown RBP4.38□□□□□ -1.71
KTN1-220ENST00000555172 SYPP08247 313 aa4.38□□□□□ -1.71
KTN1-220ENST00000555172 SRFP11831 508 aa4.38□□□□□ -1.71
KTN1-220ENST00000555172 HARSP12081 509 aaKnown RBP4.38□□□□□ -1.71
KTN1-220ENST00000555172 IFNGR1P15260 489 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms