RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 RBMXL2O75526 392 aaKnown RBP3.62□□□□□ -1.83
SRP54-204ENST00000553923 C1QL1O75973 258 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 MATN4O95460 622 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 APPP05067 770 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 SLC9A1P19634 815 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 CXCR5P32302 372 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 GZMKP49863 264 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 RNASE9P60153 205 aaKnown RBP3.62□□□□□ -1.83
SRP54-204ENST00000553923 NHLH2Q02577 135 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 SCAPQ12770 1279 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 TP53BP2Q13625 1128 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 PDCD4Q53EL6 469 aaKnown RBP3.62□□□□□ -1.83
SRP54-204ENST00000553923 TAS1R1Q7RTX1 841 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 PLXDC1Q8IUK5 500 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 MSL3Q8N5Y2 521 aaKnown RBP3.62□□□□□ -1.83
SRP54-204ENST00000553923 CAVIN3Q969G5 261 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 CLUHP3Q96NS8 147 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 FDXACB1Q9BRP7 624 aaPredicted RBP3.62□□□□□ -1.83
SRP54-204ENST00000553923 PCIF1Q9H4Z3 704 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 NCOA5Q9HCD5 579 aaKnown RBP3.62□□□□□ -1.83
SRP54-204ENST00000553923 B4GALT6Q9UBX8 382 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 UNC119BA6NIH7 251 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 H7C1D1 291 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 MAFGO15525 162 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 SEC24DO94855 1032 aaPredicted RBP3.61□□□□□ -1.83
SRP54-204ENST00000553923 SPDEFO95238 335 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 C1RP00736 705 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 IGLV2-14P01704 120 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 BLOC1S1P78537 153 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 GUCY1B3Q02153 619 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 ZNF174Q15697 407 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 ERCC6LQ2NKX8 1250 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 FAM102AQ5T9C2 384 aaPredicted RBP3.61□□□□□ -1.83
SRP54-204ENST00000553923 ANKS6Q68DC2 871 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 HDGFL2Q7Z4V5 671 aaPredicted RBP3.61□□□□□ -1.83
SRP54-204ENST00000553923 DDX53Q86TM3 631 aaKnown RBP3.61□□□□□ -1.83
SRP54-204ENST00000553923 HIST1H2AHQ96KK5 128 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 HIST1H2AJQ99878 128 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 POFUT1Q9H488 388 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 CLCA2Q9UQC9 943 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 SPO11Q9Y5K1 396 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 MAST3O60307 1309 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 MYPNQ86TC9 1320 aa3.61□□□□□ -1.83
SRP54-204ENST00000553923 A0A1W2PR48 441 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 MYADML2A6NDP7 307 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 B4E1Z4 1266 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 PLD2O14939 933 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 IGFALSP35858 605 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 TIGD7Q6NT04 549 aaPredicted RBP3.6□□□□□ -1.83
SRP54-204ENST00000553923 C1QL2Q7Z5L3 287 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 C9orf106Q8NAJ2 232 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 ZSWIM2Q8NEG5 633 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 SCARB1Q8WTV0 552 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 RTF1Q92541 710 aaKnown RBP3.6□□□□□ -1.83
SRP54-204ENST00000553923 SLC9A6Q92581 669 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 DEPDC7Q96QD5 511 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 NEU1Q99519 415 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 DNAJC7Q99615 494 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 SPATA5L1Q9BVQ7 753 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 EPC1Q9H2F5 836 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 ZMAT4Q9H898 229 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 IGSF5Q9NSI5 407 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 SEMA4GQ9NTN9 838 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 INTS7Q9NVH2 962 aaKnown RBP3.6□□□□□ -1.83
SRP54-204ENST00000553923 SNTG2Q9NY99 539 aa3.6□□□□□ -1.83
SRP54-204ENST00000553923 DNAJC9-AS1A6NH13 148 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 CGB1A6NKQ9 187 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 PRR5-ARHGAP8B1AHC4 643 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 CBX4O00257 560 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 DNAJC8O75937 253 aaPredicted RBP3.59□□□□□ -1.83
SRP54-204ENST00000553923 APOL3O95236 402 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 DDX6P26196 483 aaKnown RBP eCLIP3.59□□□□□ -1.83
SRP54-204ENST00000553923 MPP3Q13368 585 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 C7orf31Q8N865 590 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 CAGE1Q8TC20 777 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 FUBP1Q96AE4 644 aaKnown RBP3.59□□□□□ -1.83
SRP54-204ENST00000553923 USP36Q9P275 1121 aaKnown RBP3.59□□□□□ -1.83
SRP54-204ENST00000553923 TLK1Q9UKI8 766 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 HDAC5Q9UQL6 1122 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 MAP3K2Q9Y2U5 619 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 PCDHB6Q9Y5E3 794 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 ZMYM3Q14202 1370 aa3.59□□□□□ -1.83
SRP54-204ENST00000553923 TBKBP1A7MCY6 615 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 PCDH8O95206 1070 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 RAPGEF3O95398 923 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 ASLP04424 464 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 PFKMP08237 780 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 HSP90B1P14625 803 aaKnown RBP3.58□□□□□ -1.84
SRP54-204ENST00000553923 RARRES1P49788 294 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 SIM1P81133 766 aaPredicted RBP3.58□□□□□ -1.84
SRP54-204ENST00000553923 DUSP2Q05923 314 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 RESTQ13127 1097 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 ZNF460Q14592 562 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 ZNF169Q14929 603 aaPredicted RBP3.58□□□□□ -1.84
SRP54-204ENST00000553923 ZBTB41Q5SVQ8 909 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 SP5Q6BEB4 398 aaPredicted RBP3.58□□□□□ -1.84
SRP54-204ENST00000553923 CDYL2Q8N8U2 506 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 OR10H5Q8NGA6 315 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 C1QTNF7Q9BXJ2 289 aa3.58□□□□□ -1.84
SRP54-204ENST00000553923 SPON1Q9HCB6 807 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms