RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 TSHZ2Q9NRE2 1034 aa20.77■□□□□ 0.91
CHERP-204ENST00000546538 C2orf16Q68DN1 1984 aa20.76■□□□□ 0.91
CHERP-204ENST00000546538 ARL5CA6NH57 179 aa20.76■□□□□ 0.91
CHERP-204ENST00000546538 PDGFBP01127 241 aaPredicted RBP20.76■□□□□ 0.91
CHERP-204ENST00000546538 SSBP05455 408 aaKnown RBP eCLIP20.76■□□□□ 0.91
CHERP-204ENST00000546538 CNPP09543 421 aaKnown RBP20.76■□□□□ 0.91
CHERP-204ENST00000546538 ARF4P18085 180 aaPredicted RBP20.76■□□□□ 0.91
CHERP-204ENST00000546538 MLH1P40692 756 aa20.76■□□□□ 0.91
CHERP-204ENST00000546538 VCPP55072 806 aaKnown RBP20.76■□□□□ 0.91
CHERP-204ENST00000546538 DSC1Q08554 894 aa20.76■□□□□ 0.91
CHERP-204ENST00000546538 MXD4Q14582 209 aaPredicted RBP20.76■□□□□ 0.91
CHERP-204ENST00000546538 CDR2LQ86X02 465 aaPredicted RBP20.76■□□□□ 0.91
CHERP-204ENST00000546538 RNF168Q8IYW5 571 aaPredicted RBP20.76■□□□□ 0.91
CHERP-204ENST00000546538 GSTCDQ8NEC7 633 aa20.76■□□□□ 0.91
CHERP-204ENST00000546538 KLHL5Q96PQ7 755 aa20.76■□□□□ 0.91
CHERP-204ENST00000546538 PHOX2BQ99453 314 aa20.76■□□□□ 0.91
CHERP-204ENST00000546538 TMEM175Q9BSA9 504 aa20.76■□□□□ 0.91
CHERP-204ENST00000546538 NXF3Q9H4D5 531 aaKnown RBP20.76■□□□□ 0.91
CHERP-204ENST00000546538 INO80B-WBP1J3KQ70 363 aa20.75■□□□□ 0.91
CHERP-204ENST00000546538 DGAT1O75907 488 aa20.75■□□□□ 0.91
CHERP-204ENST00000546538 CLCN4P51793 760 aa20.75■□□□□ 0.91
CHERP-204ENST00000546538 POU5F1BQ06416 359 aa20.75■□□□□ 0.91
CHERP-204ENST00000546538 KIAA1841Q6NSI8 718 aa20.75■□□□□ 0.91
CHERP-204ENST00000546538 CES5AQ6NT32 575 aa20.75■□□□□ 0.91
CHERP-204ENST00000546538 FBXL6Q8N531 539 aa20.75■□□□□ 0.91
CHERP-204ENST00000546538 CSRNP2Q9H175 543 aa20.75■□□□□ 0.91
CHERP-204ENST00000546538 PRG3Q9Y2Y8 225 aaPredicted RBP20.75■□□□□ 0.91
CHERP-204ENST00000546538 PLXNA3P51805 1871 aa20.75■□□□□ 0.91
CHERP-204ENST00000546538 TTLL13PA6NNM8 815 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 MED24O75448 989 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 ERLIN2O94905 339 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 BRD1O95696 1058 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 ITGA4P13612 1032 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 SCNN1GP51170 649 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 NOTUMQ6P988 496 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 TMC5Q6UXY8 1006 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 CATSPER3Q86XQ3 398 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 KREMEN2Q8NCW0 462 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 NECTIN4Q96NY8 510 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 NFKBIZQ9BYH8 718 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 POLR3FQ9H1D9 316 aaPredicted RBP20.74■□□□□ 0.91
CHERP-204ENST00000546538 DZANK1Q9NVP4 752 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 KANSL3Q9P2N6 904 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 FAN1Q9Y2M0 1017 aa20.74■□□□□ 0.91
CHERP-204ENST00000546538 TDRD15B5MCY1 1934 aaKnown RBP20.74■□□□□ 0.91
CHERP-204ENST00000546538 USO1O60763 962 aaKnown RBP20.73■□□□□ 0.91
CHERP-204ENST00000546538 ALDH2P05091 517 aa20.73■□□□□ 0.91
CHERP-204ENST00000546538 ASGR2P07307 311 aa20.73■□□□□ 0.91
CHERP-204ENST00000546538 AXLP30530 894 aa20.73■□□□□ 0.91
CHERP-204ENST00000546538 MCM7P33993 719 aa20.73■□□□□ 0.91
CHERP-204ENST00000546538 TCF15Q12870 199 aa20.73■□□□□ 0.91
CHERP-204ENST00000546538 GIT2Q14161 759 aa20.73■□□□□ 0.91
CHERP-204ENST00000546538 CCDC51Q96ER9 411 aa20.73■□□□□ 0.91
CHERP-204ENST00000546538 VPS13AQ96RL7 3174 aa20.73■□□□□ 0.91
CHERP-204ENST00000546538 CARNS1A5YM72 827 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 SOD2P04179 222 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 EDN1P05305 212 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 ATP2B1P20020 1258 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 MTHFRP42898 656 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 TFDP1Q14186 410 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 PCBP1Q15365 356 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHERP-204ENST00000546538 MAEAQ7L5Y9 396 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 CNNM3Q8NE01 707 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 BSNDQ8WZ55 320 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 KIF2CQ99661 725 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 HERC2P3Q9BVR0 1158 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 APOL6Q9BWW8 343 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 CACNG4Q9UBN1 327 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 NR2E1Q9Y466 385 aa20.72■□□□□ 0.91
CHERP-204ENST00000546538 AKAP5P24588 427 aa20.71■□□□□ 0.91
CHERP-204ENST00000546538 MRE11P49959 708 aa20.71■□□□□ 0.91
CHERP-204ENST00000546538 BMS1Q14692 1282 aaKnown RBP20.71■□□□□ 0.91
CHERP-204ENST00000546538 KIAA0319Q5VV43 1072 aa20.71■□□□□ 0.91
CHERP-204ENST00000546538 POTEGQ6S5H5 508 aa20.71■□□□□ 0.91
CHERP-204ENST00000546538 GPR149Q86SP6 731 aa20.71■□□□□ 0.91
CHERP-204ENST00000546538 CCDC83Q8IWF9 413 aa20.71■□□□□ 0.91
CHERP-204ENST00000546538 B3GALT6Q96L58 329 aa20.71■□□□□ 0.91
CHERP-204ENST00000546538 RIPOR3Q96MK2 946 aa20.71■□□□□ 0.91
CHERP-204ENST00000546538 FAM193BQ96PV7 902 aaPredicted RBP20.71■□□□□ 0.91
CHERP-204ENST00000546538 CXCL16Q9H2A7 254 aa20.71■□□□□ 0.91
CHERP-204ENST00000546538 A0A1B0GUA9 196 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 C2CD2LO14523 706 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 XRCC6P12956 609 aaKnown RBP eCLIP20.7■□□□□ 0.9
CHERP-204ENST00000546538 OR1G1P47890 313 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 ECM1Q16610 540 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 CDCA2Q69YH5 1023 aaPredicted RBP20.7■□□□□ 0.9
CHERP-204ENST00000546538 CABP7Q86V35 215 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 RABGGTAQ92696 567 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 RPS6KC1Q96S38 1066 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 UBN1Q9NPG3 1134 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 USP20Q9Y2K6 914 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 TEX28O15482 410 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 NPTXRO95502 500 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 KLRC2P26717 231 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 TRIM29Q14134 588 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 ZNF174Q15697 407 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 ATAT1Q5SQI0 421 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 ERICH6BQ5W0A0 696 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 PPFIBP1Q86W92 1011 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 ZDHHC14Q8IZN3 488 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms