RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 POTEGQ6S5H5 508 aa25.21■■□□□ 1.63
CHD4-214ENST00000545942 AUTS2Q8WXX7 1259 aa25.21■■□□□ 1.63
CHD4-214ENST00000545942 TRIM6Q9C030 488 aaPredicted RBP25.21■■□□□ 1.63
CHD4-214ENST00000545942 FAN1Q9Y2M0 1017 aa25.21■■□□□ 1.63
CHD4-214ENST00000545942 LRRIQ4A6NIV6 560 aa25.2■■□□□ 1.62
CHD4-214ENST00000545942 U2AF2P26368 475 aaKnown RBP eCLIP25.2■■□□□ 1.62
CHD4-214ENST00000545942 RABEP1Q15276 862 aa25.2■■□□□ 1.62
CHD4-214ENST00000545942 HACE1Q8IYU2 909 aa25.2■■□□□ 1.62
CHD4-214ENST00000545942 RPGRIP1Q96KN7 1286 aa25.2■■□□□ 1.62
CHD4-214ENST00000545942 APOL5Q9BWW9 433 aa25.2■■□□□ 1.62
CHD4-214ENST00000545942 RNF39Q9H2S5 420 aa25.2■■□□□ 1.62
CHD4-214ENST00000545942 ARIH1Q9Y4X5 557 aaPredicted RBP25.2■■□□□ 1.62
CHD4-214ENST00000545942 HES2Q9Y543 173 aa25.2■■□□□ 1.62
CHD4-214ENST00000545942 ARL5CA6NH57 179 aa25.19■■□□□ 1.62
CHD4-214ENST00000545942 NRP1O14786 923 aa25.19■■□□□ 1.62
CHD4-214ENST00000545942 INPPL1O15357 1258 aa25.19■■□□□ 1.62
CHD4-214ENST00000545942 B4GALT5O43286 388 aa25.19■■□□□ 1.62
CHD4-214ENST00000545942 MUTP22033 750 aa25.19■■□□□ 1.62
CHD4-214ENST00000545942 MLH1P40692 756 aa25.19■■□□□ 1.62
CHD4-214ENST00000545942 FXR2P51116 673 aaKnown RBP eCLIP25.19■■□□□ 1.627e-13■■■■■ 31.4
CHD4-214ENST00000545942 SLC27A1Q6PCB7 646 aa25.19■■□□□ 1.62
CHD4-214ENST00000545942 GAD1Q99259 594 aa25.19■■□□□ 1.62
CHD4-214ENST00000545942 VN1R3Q9BXE9 311 aa25.19■■□□□ 1.62
CHD4-214ENST00000545942 A0A1B0GUA9 196 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 ARHGEF35A5YM69 484 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 ST18O60284 1047 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 ITIH3Q06033 890 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 NBR1Q14596 966 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 PADI6Q6TGC4 694 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 C4orf32Q8N8J7 132 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 PRIMPOLQ96LW4 560 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 GIT1Q9Y2X7 761 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 KIF3AQ9Y496 699 aa25.18■■□□□ 1.62
CHD4-214ENST00000545942 PTPN14Q15678 1187 aa25.17■■□□□ 1.62
CHD4-214ENST00000545942 CDCA2Q69YH5 1023 aaPredicted RBP25.17■■□□□ 1.62
CHD4-214ENST00000545942 CES5AQ6NT32 575 aa25.17■■□□□ 1.62
CHD4-214ENST00000545942 PPP4R3CPQ6ZMV5 832 aa25.17■■□□□ 1.62
CHD4-214ENST00000545942 ZBTB8OSQ8IWT0 167 aa25.17■■□□□ 1.62
CHD4-214ENST00000545942 ZFP42Q96MM3 310 aa25.17■■□□□ 1.62
CHD4-214ENST00000545942 APOL6Q9BWW8 343 aa25.17■■□□□ 1.62
CHD4-214ENST00000545942 ADAM7Q9H2U9 754 aa25.17■■□□□ 1.62
CHD4-214ENST00000545942 NXF3Q9H4D5 531 aaKnown RBP25.17■■□□□ 1.62
CHD4-214ENST00000545942 PRMT7Q9NVM4 692 aaPredicted RBP25.17■■□□□ 1.62
CHD4-214ENST00000545942 DZANK1Q9NVP4 752 aa25.17■■□□□ 1.62
CHD4-214ENST00000545942 LRWD1Q9UFC0 647 aa25.17■■□□□ 1.62
CHD4-214ENST00000545942 CYP11B2P19099 503 aa25.16■■□□□ 1.62
CHD4-214ENST00000545942 CCT6AP40227 531 aaKnown RBP25.16■■□□□ 1.62
CHD4-214ENST00000545942 SCNN1GP51170 649 aa25.16■■□□□ 1.62
CHD4-214ENST00000545942 DSC1Q08554 894 aa25.16■■□□□ 1.62
CHD4-214ENST00000545942 PDIA5Q14554 519 aa25.16■■□□□ 1.62
CHD4-214ENST00000545942 COLGALT2Q8IYK4 626 aa25.16■■□□□ 1.62
CHD4-214ENST00000545942 EDAQ92838 391 aa25.16■■□□□ 1.62
CHD4-214ENST00000545942 C2orf40Q9H1Z8 148 aa25.16■■□□□ 1.62
CHD4-214ENST00000545942 NPTXRO95502 500 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 PLA2G5P39877 138 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 OR1G1P47890 313 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 TOB1P50616 345 aaPredicted RBP25.15■■□□□ 1.62
CHD4-214ENST00000545942 FAM187BQ17R55 369 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 PPFIBP1Q86W92 1011 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 CDR2LQ86X02 465 aaPredicted RBP25.15■■□□□ 1.62
CHD4-214ENST00000545942 FAM122AQ96E09 287 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 NECTIN4Q96NY8 510 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 EMILIN2Q9BXX0 1053 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 RAB34Q9BZG1 259 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 FZD8Q9H461 694 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 PRG3Q9Y2Y8 225 aaPredicted RBP25.15■■□□□ 1.62
CHD4-214ENST00000545942 PCDHB6Q9Y5E3 794 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 STK24Q9Y6E0 443 aa25.15■■□□□ 1.62
CHD4-214ENST00000545942 NR1I2O75469 434 aa25.14■■□□□ 1.62
CHD4-214ENST00000545942 SSBP05455 408 aaKnown RBP eCLIP25.14■■□□□ 1.62
CHD4-214ENST00000545942 EPCAMP16422 314 aa25.14■■□□□ 1.62
CHD4-214ENST00000545942 AKAP5P24588 427 aa25.14■■□□□ 1.62
CHD4-214ENST00000545942 PTGDRQ13258 359 aa25.14■■□□□ 1.62
CHD4-214ENST00000545942 SLC22A17Q8WUG5 538 aa25.14■■□□□ 1.62
CHD4-214ENST00000545942 BSNDQ8WZ55 320 aa25.14■■□□□ 1.62
CHD4-214ENST00000545942 UPF2Q9HAU5 1272 aaKnown RBP25.14■■□□□ 1.62
CHD4-214ENST00000545942 MRPL17Q9NRX2 175 aaKnown RBP25.14■■□□□ 1.62
CHD4-214ENST00000545942 MARCH5Q9NX47 278 aa25.14■■□□□ 1.62
CHD4-214ENST00000545942 MIOSQ9NXC5 875 aa25.14■■□□□ 1.62
CHD4-214ENST00000545942 ZMYM2Q9UBW7 1377 aa25.14■■□□□ 1.61
CHD4-214ENST00000545942 LAD1O00515 517 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 SOD2P04179 222 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 NAMPTP43490 491 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 PPP2R5AQ15172 486 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 ECM1Q16610 540 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 MAPK6Q16659 721 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 IGSF22Q8N9C0 903 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 RIPOR3Q96MK2 946 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 BHMT2Q9H2M3 363 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 CDH22Q9UJ99 828 aa25.13■■□□□ 1.61
CHD4-214ENST00000545942 KLRC2P26717 231 aa25.12■■□□□ 1.61
CHD4-214ENST00000545942 MTHFRP42898 656 aa25.12■■□□□ 1.61
CHD4-214ENST00000545942 RARS2Q5T160 578 aaKnown RBP25.12■■□□□ 1.61
CHD4-214ENST00000545942 CABP7Q86V35 215 aa25.12■■□□□ 1.61
CHD4-214ENST00000545942 GSTCDQ8NEC7 633 aa25.12■■□□□ 1.61
CHD4-214ENST00000545942 DEPTORQ8TB45 409 aa25.12■■□□□ 1.61
CHD4-214ENST00000545942 SNX29Q8TEQ0 813 aa25.12■■□□□ 1.61
CHD4-214ENST00000545942 KLHL5Q96PQ7 755 aa25.12■■□□□ 1.61
CHD4-214ENST00000545942 HERC2P3Q9BVR0 1158 aa25.12■■□□□ 1.61
CHD4-214ENST00000545942 PARP2Q9UGN5 583 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms