RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 BFARQ9NZS9 450 aa20.47■□□□□ 0.87
HDAC4-215ENST00000543185 COBLO75128 1261 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 CLEC17AQ6ZS10 378 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 UBN2Q6ZU65 1347 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 EIF2S1P05198 315 aaKnown RBP20.46■□□□□ 0.87
HDAC4-215ENST00000543185 BLVRAP53004 296 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 AP3B2Q13367 1082 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 EFL1Q7Z2Z2 1120 aaKnown RBP20.46■□□□□ 0.87
HDAC4-215ENST00000543185 B4GALNT2Q8NHY0 566 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 ALAS1P13196 640 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 EEF2KMTQ96G04 330 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 SLC26A4O43511 780 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 ZNF18P17022 549 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 MCPH1Q8NEM0 835 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 FTOQ9C0B1 505 aaKnown RBP eCLIP20.46■□□□□ 0.875e-6■□□□□ 9.9
HDAC4-215ENST00000543185 PTCH1Q13635 1447 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 CMTR1Q8N1G2 835 aaKnown RBP20.46■□□□□ 0.87
HDAC4-215ENST00000543185 IMPDH2P12268 514 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
HDAC4-215ENST00000543185 RFWD2Q8NHY2 731 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 IFT43Q96FT9 208 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 ACAP3Q96P50 834 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 STAP1Q9ULZ2 295 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 INO80B-WBP1J3KQ70 363 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 INO80BQ9C086 356 aaPredicted RBP20.46■□□□□ 0.87
HDAC4-215ENST00000543185 TRABDQ9H4I3 376 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 YEATS2Q9ULM3 1422 aa20.46■□□□□ 0.87
HDAC4-215ENST00000543185 FBLN1P23142 703 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 CCDC142Q17RM4 750 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.45■□□□□ 0.86
HDAC4-215ENST00000543185 SH3TC2Q8TF17 1288 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 HACD3Q9P035 362 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 PNMA6FA0A0J9YX94 578 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 RESTQ13127 1097 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 THOC1Q96FV9 657 aaKnown RBP20.45■□□□□ 0.86
HDAC4-215ENST00000543185 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 NR3C1P04150 777 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 TNFAIP2Q03169 654 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 MXD4Q14582 209 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-215ENST00000543185 RBBP7Q16576 425 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 SLFN13Q68D06 897 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-215ENST00000543185 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.45■□□□□ 0.86
HDAC4-215ENST00000543185 ITIH4Q14624 930 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 MAGEA13PA6NCF6 341 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 ARIH2O95376 493 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 CORO7P57737 925 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 KYAT1Q16773 422 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 CLEC4FQ8N1N0 589 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 RAB42Q8N4Z0 105 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 IL17RAQ96F46 866 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 NFRKBQ6P4R8 1299 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 NBNO60934 754 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 SYCP2LQ5T4T6 812 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 TLK2Q86UE8 772 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 CYFIP2Q96F07 1278 aa20.45■□□□□ 0.86
HDAC4-215ENST00000543185 MYO18AQ92614 2054 aaKnown RBP20.45■□□□□ 0.86
HDAC4-215ENST00000543185 AKAP10O43572 662 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 TYK2P29597 1187 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 SERPINB9P50453 376 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 SDR42E1Q8WUS8 393 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 SLC9A2Q9UBY0 812 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 CDYLQ9Y232 598 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 THRAP3Q9Y2W1 955 aaKnown RBP20.44■□□□□ 0.86
HDAC4-215ENST00000543185 RWDD4Q6NW29 188 aaKnown RBP20.44■□□□□ 0.86
HDAC4-215ENST00000543185 OSBPL8Q9BZF1 889 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 PARVAQ9NVD7 372 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 APPL1Q9UKG1 709 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 LRRC53A6NM62 1247 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 ENO4A6NNW6 628 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 SPATA4Q8NEY3 305 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 ARHGEF40Q8TER5 1519 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 SLC4A1P02730 911 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 GPR141Q7Z602 305 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 CCNYL1Q8N7R7 359 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 CEP170P1Q96L14 293 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 ROPN1BQ9BZX4 212 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-215ENST00000543185 ROPN1Q9HAT0 212 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-215ENST00000543185 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-215ENST00000543185 CNOT8Q9UFF9 292 aaKnown RBP20.44■□□□□ 0.86
HDAC4-215ENST00000543185 ARMCX4Q5H9R4 360 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 EXT2Q93063 718 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 LRRC59Q96AG4 307 aaKnown RBP20.44■□□□□ 0.86
HDAC4-215ENST00000543185 VPS11Q9H270 941 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 H7C0S8 307 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 FAM47CQ5HY64 1035 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 ZNF473Q8WTR7 871 aaKnown RBP20.44■□□□□ 0.86
HDAC4-215ENST00000543185 PDLIM2Q96JY6 352 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 SNX24Q9Y343 169 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 DDIASQ8IXT1 998 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 MSTO1Q9BUK6 570 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 ZWILCHQ9H900 591 aa20.44■□□□□ 0.86
HDAC4-215ENST00000543185 PDIA2Q13087 525 aaKnown RBP20.43■□□□□ 0.86
HDAC4-215ENST00000543185 EAF2Q96CJ1 260 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-215ENST00000543185 ZFYVE19Q96K21 471 aa20.43■□□□□ 0.86
HDAC4-215ENST00000543185 KBTBD12Q3ZCT8 623 aa20.43■□□□□ 0.86
HDAC4-215ENST00000543185 KRT35Q92764 455 aa20.43■□□□□ 0.86
HDAC4-215ENST00000543185 KRCC1Q9NPI7 259 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-215ENST00000543185 ZSCAN32Q9NX65 697 aa20.43■□□□□ 0.86
HDAC4-215ENST00000543185 NDUFB9Q9Y6M9 179 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms