RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CTNND2Q9UQB3 1225 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 GINS2Q9Y248 185 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 NFE2L3Q9Y4A8 694 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 GRXCR1A8MXD5 290 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 RBAK-RBAKDNI3L0D1 243 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 HIP1RO75146 1068 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 SRGAP2CP0DJJ0 459 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 PBX2P40425 430 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 PHKA2P46019 1235 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 ZNF75DP51815 510 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 WDR5P61964 334 aaKnown RBP11.64□□□□□ -0.55
ATL3-204ENST00000540699 CACNB1Q02641 598 aaPredicted RBP11.64□□□□□ -0.55
ATL3-204ENST00000540699 DSC3Q14574 896 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 PPP2R5AQ15172 486 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 AMHR2Q16671 573 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 FAM26FQ5R3K3 315 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 CDKAL1Q5VV42 579 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 SPATA1Q5VX52 437 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 KLHL10Q6JEL2 608 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 TTI2Q6NXR4 508 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 MAEAQ7L5Y9 396 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 GUF1Q8N442 669 aaKnown RBP11.64□□□□□ -0.55
ATL3-204ENST00000540699 GLIS3Q8NEA6 775 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 LINC01599Q8WXQ3 324 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 ANP32BQ92688 251 aaKnown RBP11.64□□□□□ -0.55
ATL3-204ENST00000540699 ZNF668Q96K58 619 aaPredicted RBP11.64□□□□□ -0.55
ATL3-204ENST00000540699 NTPCRQ9BSD7 190 aaKnown RBP11.64□□□□□ -0.55
ATL3-204ENST00000540699 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
ATL3-204ENST00000540699 MTIF3Q9H2K0 278 aaKnown RBP11.64□□□□□ -0.55
ATL3-204ENST00000540699 MINDY3Q9H8M7 445 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 SLC39A2Q9NP94 309 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 FANCLQ9NW38 375 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 COL4A6Q14031 1691 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 NCOR1O75376 2440 aa11.64□□□□□ -0.55
ATL3-204ENST00000540699 FNDC1Q4ZHG4 1894 aaPredicted RBP11.63□□□□□ -0.55
ATL3-204ENST00000540699 ADGRA3Q8IWK6 1321 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.63□□□□□ -0.55
ATL3-204ENST00000540699 TNFRSF10AO00220 468 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 PSMA7O14818 248 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 KRT18P05783 430 aaKnown RBP11.63□□□□□ -0.55
ATL3-204ENST00000540699 ATP1A3P13637 1013 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 PLS3P13797 630 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 SFPQP23246 707 aaKnown RBP eCLIP11.63□□□□□ -0.55
ATL3-204ENST00000540699 CCNE1P24864 410 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 PMS1P54277 932 aaKnown RBP11.63□□□□□ -0.55
ATL3-204ENST00000540699 STX17P56962 302 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 TPM4P67936 248 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 MBTD1Q05BQ5 628 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 RAD51AP2Q09MP3 1159 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 STIM1Q13586 685 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 FAM187BQ17R55 369 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 TJAP1Q5JTD0 557 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 CENPPQ6IPU0 288 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 FOXR2Q6PJQ5 311 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 RTN4RL1Q86UN2 441 aaPredicted RBP11.63□□□□□ -0.55
ATL3-204ENST00000540699 CRIPAKQ8N1N5 446 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 PHOSPHO2Q8TCD6 241 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 SPIRE2Q8WWL2 714 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 P2RX5Q93086 422 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 IFT74Q96LB3 600 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 SCLT1Q96NL6 688 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 FIZ1Q96SL8 496 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 SLC9A7Q96T83 725 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 FGFBP2Q9BYJ0 223 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 CCDC113Q9H0I3 377 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 C2orf40Q9H1Z8 148 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 CHST12Q9NRB3 414 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 RGS18Q9NS28 235 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 SAMSN1Q9NSI8 373 aaKnown RBP11.63□□□□□ -0.55
ATL3-204ENST00000540699 AGPAT5Q9NUQ2 364 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 ARHGAP28Q9P2N2 729 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 KCNG1Q9UIX4 513 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 MAPK8IP1Q9UQF2 711 aa11.63□□□□□ -0.55
ATL3-204ENST00000540699 TRIM49BA6NDI0 452 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 LRRIQ4A6NIV6 560 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 ENPP3O14638 875 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 MGEA5O60502 916 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 CSDE1O75534 798 aaKnown RBP11.62□□□□□ -0.55
ATL3-204ENST00000540699 GAP43P17677 238 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 COL9A1P20849 921 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 SCP2P22307 547 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 CDC25BP30305 580 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 NPTX2P47972 431 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 EFNA5P52803 228 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 PEX3P56589 373 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 FAM189BP81408 668 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 NFX1Q12986 1120 aaKnown RBP11.62□□□□□ -0.55
ATL3-204ENST00000540699 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
ATL3-204ENST00000540699 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.62□□□□□ -0.554e-6■■■■□ 20.5
ATL3-204ENST00000540699 EPM2AIP1Q7L775 607 aaPredicted RBP11.62□□□□□ -0.55
ATL3-204ENST00000540699 APTXQ7Z2E3 356 aaKnown RBP11.62□□□□□ -0.55
ATL3-204ENST00000540699 SFR1Q86XK3 245 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 MRFAP1L1Q96HT8 127 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 PRIMPOLQ96LW4 560 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 DUSP9Q99956 384 aaKnown RBP11.62□□□□□ -0.55
ATL3-204ENST00000540699 FZD8Q9H461 694 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 POLD4Q9HCU8 107 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 OLFML3Q9NRN5 406 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms