RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
TRAF1-202ENST00000540010 ERVK-24P63145 666 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 ITIH3Q06033 890 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 DPY19L2Q6NUT2 758 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 ANKRD35Q8N283 1001 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 LRRC8CQ8TDW0 803 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 RSAD2Q8WXG1 361 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 SH2D3AQ9BRG2 576 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 TBC1D22BQ9NU19 505 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 HOXC10Q9NYD6 342 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 AMACRQ9UHK6 382 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 ARHGAP42A6NI28 874 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 MAIP1Q8WWC4 291 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 CLEC4DQ8WXI8 215 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 PURBQ96QR8 312 aaKnown RBP10.72□□□□□ -0.69
TRAF1-202ENST00000540010 PAGR1Q9BTK6 254 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 EHD2Q9NZN4 543 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 SNX12Q9UMY4 172 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 GOLGA8IPA6NC78 632 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 GOLGA8JA6NMD2 632 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 EIF4E1BA6NMX2 242 aaKnown RBP10.72□□□□□ -0.69
TRAF1-202ENST00000540010 I3L4J1 428 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 MAPK4P31152 587 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 CASP5P51878 434 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 BEND6Q5SZJ8 279 aaPredicted RBP10.72□□□□□ -0.69
TRAF1-202ENST00000540010 PCNX4Q63HM2 1172 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 PADI6Q6TGC4 694 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 RPAINQ86UA6 219 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 ERGIC2Q96RQ1 377 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 HSD17B14Q9BPX1 270 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 TEX13BQ9BXU2 312 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 DUSP10Q9Y6W6 482 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 HNRNPDLO14979 420 aaKnown RBP10.72□□□□□ -0.69
TRAF1-202ENST00000540010 MAP7D1Q3KQU3 841 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 EAPPQ56P03 285 aaPredicted RBP10.72□□□□□ -0.69
TRAF1-202ENST00000540010 SCYL2Q6P3W7 929 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 ZNF449Q6P9G9 518 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 CEP128Q6ZU80 1094 aa10.72□□□□□ -0.69
TRAF1-202ENST00000540010 MMEP08473 750 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 QARSP47897 775 aaKnown RBP10.71□□□□□ -0.69
TRAF1-202ENST00000540010 BFSP1Q12934 665 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 MIIPQ5JXC2 388 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 CCNI2Q6ZMN8 369 aaPredicted RBP10.71□□□□□ -0.69
TRAF1-202ENST00000540010 LRRC55Q6ZSA7 311 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 SEPT14Q6ZU15 432 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 FAM47EQ6ZV65 393 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 CFAP61Q8NHU2 1237 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 NSUN6Q8TEA1 469 aaKnown RBP10.71□□□□□ -0.69
TRAF1-202ENST00000540010 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRAF1-202ENST00000540010 KLRG1Q96E93 195 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 GOLPH3Q9H4A6 298 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 RAB20Q9NX57 234 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 PPP2R3BQ9Y5P8 575 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 DAPK3O43293 454 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 ECEL1O95672 775 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 NR3C1P04150 777 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 IREB2P48200 963 aaKnown RBP10.71□□□□□ -0.69
TRAF1-202ENST00000540010 LIG4P49917 911 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 PGM5Q15124 567 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 TMED2Q15363 201 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 ZNF746Q6NUN9 644 aaPredicted RBP10.71□□□□□ -0.69
TRAF1-202ENST00000540010 KCTD17Q8N5Z5 321 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 PDCD2LQ9BRP1 358 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 ACAD9Q9H845 621 aa10.71□□□□□ -0.69
TRAF1-202ENST00000540010 TYW1Q9NV66 732 aaKnown RBP10.71□□□□□ -0.69
TRAF1-202ENST00000540010 NR3C2P08235 984 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 MAN1A1P33908 653 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 SEC24CP53992 1094 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 PTK2Q05397 1052 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.7
TRAF1-202ENST00000540010 EDRF1Q3B7T1 1238 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 GNPTABQ3T906 1256 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 ZC2HC1CQ53FD0 456 aaPredicted RBP10.71□□□□□ -0.7
TRAF1-202ENST00000540010 DLK2Q6UY11 383 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 CCDC97Q96F63 343 aaPredicted RBP10.71□□□□□ -0.7
TRAF1-202ENST00000540010 WNK4Q96J92 1243 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 NT5C1BQ96P26 610 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 IWS1Q96ST2 819 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 VCXQ9H320 206 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 AGO4Q9HCK5 861 aaKnown RBP10.71□□□□□ -0.7
TRAF1-202ENST00000540010 PXMP2Q9NR77 195 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 ADARB2Q9NS39 739 aaKnown RBP10.71□□□□□ -0.7
TRAF1-202ENST00000540010 MAP3K20Q9NYL2 800 aaKnown RBP10.71□□□□□ -0.7
TRAF1-202ENST00000540010 GGT7Q9UJ14 662 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 DNAJC12Q9UKB3 198 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 PRDM4Q9UKN5 801 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 RIPK3Q9Y572 518 aa10.71□□□□□ -0.7
TRAF1-202ENST00000540010 WDR64B1ANS9 1081 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 ADM5C9JUS6 153 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 DSG3P32926 999 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 NCAPG2Q86XI2 1143 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 OR2W6PQ8NHA6 318 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 P3H4Q92791 437 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 OTUD5Q96G74 571 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 SGIP1Q9BQI5 828 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 CEP72Q9P209 647 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 CLEC11AQ9Y240 323 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 TTLL3Q9Y4R7 772 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 GMNCA6NCL1 334 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 CCDC188H7C350 402 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms