RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 RNF169Q8NCN4 708 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 KCNN1Q92952 543 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 LPPQ93052 612 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 CCDC51Q96ER9 411 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 LRCH3Q96II8 777 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 ACO2Q99798 780 aaKnown RBP13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 MRPL4Q9BYD3 311 aaKnown RBP13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 ST6GALNAC4Q9H4F1 302 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 OLFML3Q9NRN5 406 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 RNF19AQ9NV58 838 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 TMEM161AQ9NX61 479 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 TBX20Q9UMR3 447 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 PCDHB2Q9Y5E7 798 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 PCDHA11Q9Y5I1 949 aa13.97□□□□□ -0.17
TSPAN9-207ENST00000539631 PVALEFA0A1B0GWK0 134 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 LCHNA4D1U4 455 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 MEIS3P2A8K0S8 358 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 ZNF623O75123 536 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 PPP1R37O75864 691 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 DGKIO75912 1065 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 GCNT3O95395 438 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 EOMESO95936 686 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 FGFR1P11362 822 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 SKIP12755 728 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 RAB27AP51159 221 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 EHHADHQ08426 723 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 DPYDQ12882 1025 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 RAB30Q15771 203 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 ATF7IP2Q5U623 682 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 KANK3Q6NY19 840 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 SMG8Q8ND04 991 aaKnown RBP13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 GLIS3Q8NEA6 775 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 ZNF689Q96CS4 500 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 ZBTB45Q96K62 511 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 TIGD1Q96MW7 591 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 RAD9AQ99638 391 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 STRA6Q9BX79 667 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 NKX2-4Q9H2Z4 354 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 MSRAQ9UJ68 235 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 TNFSF13BQ9Y275 285 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 IPPQ9Y573 584 aa13.96□□□□□ -0.17
TSPAN9-207ENST00000539631 ARHGEF15O94989 841 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 RPN1P04843 607 aaKnown RBP13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 MYL1P05976 194 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 SCP2P22307 547 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 DNAJB2P25686 324 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 PNOCQ13519 176 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 POSTNQ15063 836 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 PAN2Q504Q3 1202 aaKnown RBP13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 FAM26FQ5R3K3 315 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 MRPL10Q7Z7H8 261 aaKnown RBP13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 MAP4K3Q8IVH8 894 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 HVCN1Q96D96 273 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 BICD1Q96G01 975 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 YME1L1Q96TA2 773 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 ADPGKQ9BRR6 497 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 APOL6Q9BWW8 343 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 TRIM6Q9C030 488 aaPredicted RBP13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 IKZF4Q9H2S9 585 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 RC3H2Q9HBD1 1191 aaKnown RBP13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 PTPRHQ9HD43 1115 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 HES2Q9Y543 173 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 INSL6Q9Y581 213 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 TDRD15B5MCY1 1934 aaKnown RBP13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 RALGAPA2Q2PPJ7 1873 aa13.95□□□□□ -0.18
TSPAN9-207ENST00000539631 ABLIM1O14639 778 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 PRPF6O94906 941 aaKnown RBP13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 CA3P07451 260 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 ITGA4P13612 1032 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 PROZP22891 400 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 ABCD1P33897 745 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 KCNA1Q09470 495 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 CLLU1OSQ5K130 101 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 L1TD1Q5T7N2 865 aaKnown RBP13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 ZPBP2Q6X784 338 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 AGMOQ6ZNB7 445 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 ZBTB33Q86T24 672 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 SP7Q8TDD2 431 aaPredicted RBP13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 TIFAQ96CG3 184 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 PGBD4Q96DM1 585 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 CCDC34Q96HJ3 373 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 CDT1Q9H211 546 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 NXF3Q9H4D5 531 aaKnown RBP13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 SLC39A2Q9NP94 309 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 EXOC1Q9NV70 894 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 PCDHB13Q9Y5F0 798 aa13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 LAMA2P24043 3122 aaKnown RBP13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 RANBP2P49792 3224 aaKnown RBP13.94□□□□□ -0.18
TSPAN9-207ENST00000539631 TRIP11Q15643 1979 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 TBKBP1A7MCY6 615 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 ANKRD63C9JTQ0 380 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 PIGRP01833 764 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 HARSP12081 509 aaKnown RBP13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 MATR3P43243 847 aaKnown RBP eCLIP13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 LIG4P49917 911 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms