RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 KIF3AQ9Y496 699 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 ARHGEF35A5YM69 484 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 INPPL1O15357 1258 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 B4GALT5O43286 388 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 MLH1P40692 756 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 FXR2P51116 673 aaKnown RBP eCLIP24.61■■□□□ 1.53
SCARB1-206ENST00000539320 GIT2Q14161 759 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 HERC4Q5GLZ8 1057 aaPredicted RBP24.61■■□□□ 1.53
SCARB1-206ENST00000539320 HACE1Q8IYU2 909 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 VN1R3Q9BXE9 311 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 STK39Q9UEW8 545 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 HES2Q9Y543 173 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 IRAK3Q9Y616 596 aa24.61■■□□□ 1.53
SCARB1-206ENST00000539320 MUTP22033 750 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 CBX2Q14781 532 aaPredicted RBP24.6■■□□□ 1.53
SCARB1-206ENST00000539320 TPRNQ4KMQ1 711 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 CDCA2Q69YH5 1023 aaPredicted RBP24.6■■□□□ 1.53
SCARB1-206ENST00000539320 PADI6Q6TGC4 694 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 PPP4R3CPQ6ZMV5 832 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 ZBTB8OSQ8IWT0 167 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 C4orf32Q8N8J7 132 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 TMEM87AQ8NBN3 555 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 GAD1Q99259 594 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 APOL6Q9BWW8 343 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 APOL5Q9BWW9 433 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 RNF39Q9H2S5 420 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 NXF3Q9H4D5 531 aaKnown RBP24.6■■□□□ 1.53
SCARB1-206ENST00000539320 FAN1Q9Y2M0 1017 aa24.6■■□□□ 1.53
SCARB1-206ENST00000539320 CCT6AP40227 531 aaKnown RBP24.59■■□□□ 1.53
SCARB1-206ENST00000539320 PTPN14Q15678 1187 aa24.59■■□□□ 1.53
SCARB1-206ENST00000539320 SLC27A1Q6PCB7 646 aa24.59■■□□□ 1.53
SCARB1-206ENST00000539320 RPGRIP1Q96KN7 1286 aa24.59■■□□□ 1.53
SCARB1-206ENST00000539320 PRIMPOLQ96LW4 560 aa24.59■■□□□ 1.53
SCARB1-206ENST00000539320 UPF2Q9HAU5 1272 aaKnown RBP24.59■■□□□ 1.53
SCARB1-206ENST00000539320 PRMT7Q9NVM4 692 aaPredicted RBP24.59■■□□□ 1.53
SCARB1-206ENST00000539320 GIT1Q9Y2X7 761 aa24.59■■□□□ 1.53
SCARB1-206ENST00000539320 ZMYM2Q9UBW7 1377 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 ARL5CA6NH57 179 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 NPTXRO95502 500 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 ALDH2P05091 517 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 CYP11B2P19099 503 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 SCNN1GP51170 649 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 CDR2LQ86X02 465 aaPredicted RBP24.58■■□□□ 1.53
SCARB1-206ENST00000539320 BSNDQ8WZ55 320 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 ZFP42Q96MM3 310 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 RAB34Q9BZG1 259 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 C2orf40Q9H1Z8 148 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 DZANK1Q9NVP4 752 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 LRWD1Q9UFC0 647 aa24.58■■□□□ 1.53
SCARB1-206ENST00000539320 PRG3Q9Y2Y8 225 aaPredicted RBP24.58■■□□□ 1.53
SCARB1-206ENST00000539320 TECTAO75443 2155 aa24.57■■□□□ 1.52
SCARB1-206ENST00000539320 NRP1O14786 923 aa24.57■■□□□ 1.52
SCARB1-206ENST00000539320 TOB1P50616 345 aaPredicted RBP24.57■■□□□ 1.52
SCARB1-206ENST00000539320 DSC1Q08554 894 aa24.57■■□□□ 1.52
SCARB1-206ENST00000539320 COLGALT2Q8IYK4 626 aa24.57■■□□□ 1.52
SCARB1-206ENST00000539320 MARCH5Q9NX47 278 aa24.57■■□□□ 1.52
SCARB1-206ENST00000539320 PCDHB6Q9Y5E3 794 aa24.57■■□□□ 1.52
SCARB1-206ENST00000539320 STK24Q9Y6E0 443 aa24.57■■□□□ 1.52
SCARB1-206ENST00000539320 A0A1B0GUA9 196 aa24.56■■□□□ 1.52
SCARB1-206ENST00000539320 OR1G1P47890 313 aa24.56■■□□□ 1.52
SCARB1-206ENST00000539320 PTGDRQ13258 359 aa24.56■■□□□ 1.52
SCARB1-206ENST00000539320 ECM1Q16610 540 aa24.56■■□□□ 1.52
SCARB1-206ENST00000539320 FAM187BQ17R55 369 aa24.56■■□□□ 1.52
SCARB1-206ENST00000539320 SNX29Q8TEQ0 813 aa24.56■■□□□ 1.52
SCARB1-206ENST00000539320 TMX3Q96JJ7 454 aa24.56■■□□□ 1.52
SCARB1-206ENST00000539320 HERC2P3Q9BVR0 1158 aa24.56■■□□□ 1.52
SCARB1-206ENST00000539320 FZD8Q9H461 694 aa24.56■■□□□ 1.52
SCARB1-206ENST00000539320 MUC6Q6W4X9 2439 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 TDRD15B5MCY1 1934 aaKnown RBP24.55■■□□□ 1.52
SCARB1-206ENST00000539320 LAD1O00515 517 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 SSBP05455 408 aaKnown RBP eCLIP24.55■■□□□ 1.52
SCARB1-206ENST00000539320 EPCAMP16422 314 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 NAMPTP43490 491 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 ITIH3Q06033 890 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 PPP2R5AQ15172 486 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 CES5AQ6NT32 575 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 PPFIBP1Q86W92 1011 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 IGSF22Q8N9C0 903 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 NECTIN4Q96NY8 510 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 EMILIN2Q9BXX0 1053 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 BHMT2Q9H2M3 363 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 ADAM7Q9H2U9 754 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 CDH22Q9UJ99 828 aa24.55■■□□□ 1.52
SCARB1-206ENST00000539320 N4BP3O15049 544 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 SOD2P04179 222 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 PRKCBP05771 671 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 URODP06132 367 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 AKAP5P24588 427 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 PDIA5Q14554 519 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 MAPK6Q16659 721 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 TMEM132AQ24JP5 1023 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 MCTP1Q6DN14 999 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 DEPTORQ8TB45 409 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 SLC22A17Q8WUG5 538 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.54■■□□□ 1.52
SCARB1-206ENST00000539320 DDX19AQ9NUU7 478 aaKnown RBP24.54■■□□□ 1.52
SCARB1-206ENST00000539320 MIOSQ9NXC5 875 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 KIAA1024Q9UPX6 916 aa24.54■■□□□ 1.52
SCARB1-206ENST00000539320 NR1I2O75469 434 aa24.53■■□□□ 1.52
SCARB1-206ENST00000539320 CD2BP2O95400 341 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms