RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 PRPF6O94906 941 aaKnown RBP14.42□□□□□ -0.1
TMEM258-202ENST00000535042 GCNT3O95395 438 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 NPTXRO95502 500 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 RPN1P04843 607 aaKnown RBP14.42□□□□□ -0.1
TMEM258-202ENST00000535042 MYL1P05976 194 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 GATMP50440 423 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 STRN3Q13033 797 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 FAM26FQ5R3K3 315 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 ATF7IP2Q5U623 682 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 KANK3Q6NY19 840 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 SMG8Q8ND04 991 aaKnown RBP14.42□□□□□ -0.1
TMEM258-202ENST00000535042 LPPQ93052 612 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 CCDC51Q96ER9 411 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 ZBTB45Q96K62 511 aaPredicted RBP14.42□□□□□ -0.1
TMEM258-202ENST00000535042 MRPL4Q9BYD3 311 aaKnown RBP14.42□□□□□ -0.1
TMEM258-202ENST00000535042 ELAC1Q9H777 363 aaKnown RBP14.42□□□□□ -0.1
TMEM258-202ENST00000535042 TMEM161AQ9NX61 479 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 TNFSF13BQ9Y275 285 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 YBX2Q9Y2T7 364 aaKnown RBP14.42□□□□□ -0.1
TMEM258-202ENST00000535042 HES2Q9Y543 173 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 PCDHB2Q9Y5E7 798 aa14.42□□□□□ -0.1
TMEM258-202ENST00000535042 LCHNA4D1U4 455 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 N4BP3O15049 544 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 KINO60870 393 aaKnown RBP14.41□□□□□ -0.1
TMEM258-202ENST00000535042 DGKIO75912 1065 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 ARHGEF15O94989 841 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 PIGRP01833 764 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 FGFR1P11362 822 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 PROZP22891 400 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 HOXD13P35453 343 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 HTRA4P83105 476 aaPredicted RBP14.41□□□□□ -0.1
TMEM258-202ENST00000535042 STK4Q13043 487 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 TMEM132AQ24JP5 1023 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 HABP4Q5JVS0 413 aaKnown RBP14.41□□□□□ -0.1
TMEM258-202ENST00000535042 SLC39A4Q6P5W5 647 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 SLC27A1Q6PCB7 646 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 EPM2AIP1Q7L775 607 aaPredicted RBP14.41□□□□□ -0.1
TMEM258-202ENST00000535042 MRPL10Q7Z7H8 261 aaKnown RBP14.41□□□□□ -0.1
TMEM258-202ENST00000535042 MAP4K3Q8IVH8 894 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 ELOA2Q8IYF1 753 aaPredicted RBP14.41□□□□□ -0.1
TMEM258-202ENST00000535042 RNF169Q8NCN4 708 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 SLC17A8Q8NDX2 589 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 PBX4Q9BYU1 374 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 HAPLN2Q9GZV7 340 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 RC3H2Q9HBD1 1191 aaKnown RBP14.41□□□□□ -0.1
TMEM258-202ENST00000535042 SLC39A2Q9NP94 309 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 IPPQ9Y573 584 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 PCDHB7Q9Y5E2 793 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 PTPRSQ13332 1948 aa14.41□□□□□ -0.1
TMEM258-202ENST00000535042 TISP43B9A030 160 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 ANKRD63C9JTQ0 380 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 STAG3L1P0CL83 205 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 SCP2P22307 547 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 RAB27AP51159 221 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 SMAD3P84022 425 aaKnown RBP14.4□□□□□ -0.1
TMEM258-202ENST00000535042 CLLU1OSQ5K130 101 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 L1TD1Q5T7N2 865 aaKnown RBP14.4□□□□□ -0.1
TMEM258-202ENST00000535042 ZPBP2Q6X784 338 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 AGMOQ6ZNB7 445 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 ZBTB33Q86T24 672 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 KIAA0895Q8NCT3 520 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 GPT2Q8TD30 523 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 ZNF689Q96CS4 500 aaPredicted RBP14.4□□□□□ -0.1
TMEM258-202ENST00000535042 HVCN1Q96D96 273 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 RAD9AQ99638 391 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 ZBED2Q9BTP6 218 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 CDT1Q9H211 546 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 NXF3Q9H4D5 531 aaKnown RBP14.4□□□□□ -0.1
TMEM258-202ENST00000535042 EXOC1Q9NV70 894 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 LRFN2Q9ULH4 789 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 PCDHA5Q9Y5H7 936 aa14.4□□□□□ -0.1
TMEM258-202ENST00000535042 COL4A6Q14031 1691 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 TTC3P53804 2025 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 TLL1O43897 1013 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 TOM1L1O75674 476 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 RHOBTB3O94955 611 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 EOMESO95936 686 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 SKIP12755 728 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 ALCAMQ13740 583 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 KCNB1Q14721 858 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 CEP120Q8N960 986 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 SPATA20Q8TB22 786 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 SCFD1Q8WVM8 642 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 BICD1Q96G01 975 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 CCDC34Q96HJ3 373 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 LRCH3Q96II8 777 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 ACCSQ96QU6 501 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 PCDHA11Q9Y5I1 949 aa14.39□□□□□ -0.11
TMEM258-202ENST00000535042 MYH11P35749 1972 aa14.38□□□□□ -0.11
TMEM258-202ENST00000535042 GOLGA6L22H0YM25 854 aa14.38□□□□□ -0.11
TMEM258-202ENST00000535042 HNRNPDLO14979 420 aaKnown RBP14.38□□□□□ -0.11
TMEM258-202ENST00000535042 OFD1O75665 1012 aa14.38□□□□□ -0.11
TMEM258-202ENST00000535042 CA3P07451 260 aa14.38□□□□□ -0.11
TMEM258-202ENST00000535042 HARSP12081 509 aaKnown RBP14.38□□□□□ -0.11
TMEM258-202ENST00000535042 ITGA4P13612 1032 aa14.38□□□□□ -0.11
TMEM258-202ENST00000535042 AKAP5P24588 427 aa14.38□□□□□ -0.11
TMEM258-202ENST00000535042 ABCD1P33897 745 aa14.38□□□□□ -0.11
TMEM258-202ENST00000535042 MCM4P33991 863 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms