RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 PGBD4Q96DM1 585 aa15.44■□□□□ 0.06
CMTM1-218ENST00000533915 RNPC3Q96LT9 517 aaKnown RBP15.44■□□□□ 0.06
CMTM1-218ENST00000533915 ACO2Q99798 780 aaKnown RBP15.44■□□□□ 0.06
CMTM1-218ENST00000533915 STRA6Q9BX79 667 aa15.44■□□□□ 0.06
CMTM1-218ENST00000533915 TMX1Q9H3N1 280 aa15.44■□□□□ 0.06
CMTM1-218ENST00000533915 CGNQ9P2M7 1197 aaKnown RBP15.44■□□□□ 0.06
CMTM1-218ENST00000533915 LRFN2Q9ULH4 789 aa15.44■□□□□ 0.06
CMTM1-218ENST00000533915 MICAL3Q7RTP6 2002 aa15.44■□□□□ 0.06
CMTM1-218ENST00000533915 A0A0U1RQF3 1178 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 CLDN3O15551 220 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 B4GALT5O43286 388 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 HOXA2O43364 376 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 EOMESO95936 686 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 PIGRP01833 764 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 HOXA11P31270 313 aaPredicted RBP15.43■□□□□ 0.06
CMTM1-218ENST00000533915 SARSP49591 514 aaKnown RBP15.43■□□□□ 0.06
CMTM1-218ENST00000533915 EPHB4P54760 987 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 STK4Q13043 487 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 DSC3Q14574 896 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 MPZL3Q6UWV2 235 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 EPM2AIP1Q7L775 607 aaPredicted RBP15.43■□□□□ 0.06
CMTM1-218ENST00000533915 PHOSPHO2Q8TCD6 241 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 RSPH1Q8WYR4 309 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 HPS3Q969F9 1004 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 CPB2Q96IY4 423 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 SLC9A7Q96T83 725 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 TARS2Q9BW92 718 aaKnown RBP15.43■□□□□ 0.06
CMTM1-218ENST00000533915 OSBPL7Q9BZF2 842 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 UBN1Q9NPG3 1134 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 PCDHB7Q9Y5E2 793 aa15.43■□□□□ 0.06
CMTM1-218ENST00000533915 ZNF623O75123 536 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 PRPF6O94906 941 aaKnown RBP15.42■□□□□ 0.06
CMTM1-218ENST00000533915 LETM1O95202 739 aaPredicted RBP15.42■□□□□ 0.06
CMTM1-218ENST00000533915 MCF2P10911 925 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 CASP5P51878 434 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 WDR5P61964 334 aaKnown RBP15.42■□□□□ 0.06
CMTM1-218ENST00000533915 KNOP1Q1ED39 458 aaKnown RBP15.42■□□□□ 0.06
CMTM1-218ENST00000533915 BMT2Q1RMZ1 405 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 ZNF568Q3ZCX4 644 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 PRPF38BQ5VTL8 546 aaKnown RBP15.42■□□□□ 0.06
CMTM1-218ENST00000533915 TAS1R3Q7RTX0 852 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 NPAS4Q8IUM7 802 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 GUF1Q8N442 669 aaKnown RBP15.42■□□□□ 0.06
CMTM1-218ENST00000533915 VWCEQ96DN2 955 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 GBP3Q9H0R5 595 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 PDZD7Q9H5P4 517 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 ELAC1Q9H777 363 aaKnown RBP15.42■□□□□ 0.06
CMTM1-218ENST00000533915 FAM105AQ9NUU6 356 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 ANKFY1Q9P2R3 1169 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 PCDHB2Q9Y5E7 798 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 TTC3P53804 2025 aa15.42■□□□□ 0.06
CMTM1-218ENST00000533915 A0A1W2PPC1 479 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 C9IYK1 514 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 PSMA7O14818 248 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 KIAA0391O15091 583 aaKnown RBP15.41■□□□□ 0.06
CMTM1-218ENST00000533915 MGEA5O60502 916 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 NPTXRO95502 500 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 FAM189BP81408 668 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 NOLC1Q14978 699 aaKnown RBP eCLIP15.41■□□□□ 0.06
CMTM1-218ENST00000533915 COBLL1Q53SF7 1204 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 CHRDL2Q6WN34 429 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 TDHQ8IZJ6 230 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 KIAA0895Q8NCT3 520 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 SCFD1Q8WVM8 642 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 ERCC4Q92889 916 aaPredicted RBP15.41■□□□□ 0.06
CMTM1-218ENST00000533915 ZBED2Q9BTP6 218 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 TMEM161AQ9NX61 479 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 DACH1Q9UI36 760 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 MAN1B1Q9UKM7 699 aa15.41■□□□□ 0.06
CMTM1-218ENST00000533915 BIN1O00499 593 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 CALUO43852 315 aaPredicted RBP15.4■□□□□ 0.06
CMTM1-218ENST00000533915 ITGA4P13612 1032 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 ATP2A2P16615 1042 aaKnown RBP15.4■□□□□ 0.06
CMTM1-218ENST00000533915 GARTP22102 1010 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 PROZP22891 400 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 MCL1Q07820 350 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 MORC3Q14149 939 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 SHHQ15465 462 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 NFKBIBQ15653 356 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 CAVIN1Q6NZI2 390 aaKnown RBP15.4■□□□□ 0.06
CMTM1-218ENST00000533915 SASS6Q6UVJ0 657 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 RTN4RL1Q86UN2 441 aaPredicted RBP15.4■□□□□ 0.06
CMTM1-218ENST00000533915 ECHDC2Q86YB7 292 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 NELFCDQ8IXH7 590 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 ABI1Q8IZP0 508 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 RNF169Q8NCN4 708 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 POMGNT1Q8WZA1 660 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 TSG101Q99816 390 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 MSTO1Q9BUK6 570 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 CCDC94Q9BW85 323 aaPredicted RBP15.4■□□□□ 0.06
CMTM1-218ENST00000533915 PTPRHQ9HD43 1115 aa15.4■□□□□ 0.06
CMTM1-218ENST00000533915 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.39■□□□□ 0.05
CMTM1-218ENST00000533915 PDXKO00764 312 aa15.39■□□□□ 0.05
CMTM1-218ENST00000533915 LDHAP00338 332 aaKnown RBP15.39■□□□□ 0.05
CMTM1-218ENST00000533915 IBSPP21815 317 aaPredicted RBP15.39■□□□□ 0.05
CMTM1-218ENST00000533915 YARSP54577 528 aaKnown RBP15.39■□□□□ 0.05
CMTM1-218ENST00000533915 TCTN1Q2MV58 587 aa15.39■□□□□ 0.05
CMTM1-218ENST00000533915 C9orf50Q5SZB4 431 aa15.39■□□□□ 0.05
CMTM1-218ENST00000533915 RASIP1Q5U651 963 aa15.39■□□□□ 0.05
CMTM1-218ENST00000533915 ARMCX5Q6P1M9 558 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms