RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CCDC105Q8IYK2 499 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 PRELID2Q8N945 189 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 FAM84AQ96KN4 292 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 HGSO14964 777 aaPredicted RBP20.81■□□□□ 0.92
CAPN1-226ENST00000533820 PSMD10O75832 226 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 VCAM1P19320 739 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 ANKRD20A8PQ5CZ79 823 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 RBM26Q5T8P6 1007 aaKnown RBP20.81■□□□□ 0.92
CAPN1-226ENST00000533820 SEC14L1Q92503 715 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 PAGR1Q9BTK6 254 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 ATAD5Q96QE3 1844 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 EIF3DO15371 548 aaKnown RBP eCLIP20.81■□□□□ 0.92
CAPN1-226ENST00000533820 SGPL1O95470 568 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 VIMP08670 466 aaKnown RBP20.81■□□□□ 0.92
CAPN1-226ENST00000533820 DRD4P21917 467 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 GRIK3Q13003 919 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 LRRC14Q15048 493 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 CHMP6Q96FZ7 201 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 ZDHHC15Q96MV8 337 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 SYT11Q9BT88 431 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 TMX4Q9H1E5 349 aaPredicted RBP20.81■□□□□ 0.92
CAPN1-226ENST00000533820 PABPC3Q9H361 631 aaKnown RBP20.81■□□□□ 0.92
CAPN1-226ENST00000533820 PYGMP11217 842 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 CCDC137Q6PK04 289 aaKnown RBP20.8■□□□□ 0.92
CAPN1-226ENST00000533820 PPM1KQ8N3J5 372 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 CSRNP1Q96S65 589 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 PRMT1Q99873 361 aaKnown RBP20.8■□□□□ 0.92
CAPN1-226ENST00000533820 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 A0A1B0GUA9 196 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 SPOPO43791 374 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 RTN2O75298 545 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 ANXA13P27216 316 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 PRELPP51888 382 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 SMTNP53814 917 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 HOOK3Q86VS8 718 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 CCDC127Q96BQ5 260 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 HVCN1Q96D96 273 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 ELAC2Q9BQ52 826 aaKnown RBP20.8■□□□□ 0.92
CAPN1-226ENST00000533820 MYH11P35749 1972 aa20.8■□□□□ 0.92
CAPN1-226ENST00000533820 ATXN2Q99700 1313 aaKnown RBP20.8■□□□□ 0.92
CAPN1-226ENST00000533820 ADRA2BP18089 450 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 SCTRP47872 440 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 PCDHB18PQ96TA0 734 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 NAP1L3Q99457 506 aaPredicted RBP20.79■□□□□ 0.92
CAPN1-226ENST00000533820 SH3GL3Q99963 347 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 FBXO28Q9NVF7 368 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 RPS6KL1Q9Y6S9 549 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 FOCADQ5VW36 1801 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 CYP26A1O43174 497 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 STAT2P52630 851 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 ADCY1Q08828 1119 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 MSL1Q68DK7 614 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 RPTORQ8N122 1335 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 ZNF831Q5JPB2 1677 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 TCP10L2B9ZVM9 353 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 TRIP13Q15645 432 aaPredicted RBP20.79■□□□□ 0.92
CAPN1-226ENST00000533820 LRRC34Q8IZ02 419 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 DAW1Q8N136 415 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 TLCD1Q96CP7 247 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 NACC1Q96RE7 527 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 GRHL1Q9NZI5 618 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 RASAL2Q9UJF2 1139 aa20.79■□□□□ 0.92
CAPN1-226ENST00000533820 ANKRD33BA6NCL7 494 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 SLC26A4O43511 780 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 BCRP11274 1271 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 FAM133BQ5BKY9 247 aaKnown RBP20.78■□□□□ 0.92
CAPN1-226ENST00000533820 UBL4BQ8N7F7 174 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 MICAL1Q8TDZ2 1067 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 TXLNGYQ9BZA5 131 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 TUFT1Q9NNX1 390 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 FRMPD4Q14CM0 1322 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 CLRN2A0PK11 232 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 RASSF9O75901 435 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 ACSL3O95573 720 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 POLR2MP0CAP2 368 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 VPS41P49754 854 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 ERMARDQ5T6L9 678 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 TATDN1Q6P1N9 297 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 CYB5D1Q6P9G0 228 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 SLC47A2Q86VL8 602 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 C1orf54Q8WWF1 131 aa20.78■□□□□ 0.92
CAPN1-226ENST00000533820 INTS9Q9NV88 658 aaKnown RBP20.78■□□□□ 0.92
CAPN1-226ENST00000533820 TTC7AQ9ULT0 858 aaPredicted RBP20.78■□□□□ 0.92
CAPN1-226ENST00000533820 EPC2Q52LR7 807 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 CEP55Q53EZ4 464 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 PADI6Q6TGC4 694 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 STXBP4Q6ZWJ1 553 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 LMO3Q8TAP4 145 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 GMCL1Q96IK5 515 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 MKNK1Q9BUB5 465 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 FAM129AQ9BZQ8 928 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 DMAC2Q9NW81 257 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 IPO5O00410 1097 aaKnown RBP20.77■□□□□ 0.92
CAPN1-226ENST00000533820 PHF2O75151 1096 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 PTGIRP43119 386 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 VAMP7P51809 220 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 EIF3BP55884 814 aaKnown RBP20.77■□□□□ 0.92
CAPN1-226ENST00000533820 LONRF1Q17RB8 773 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 C2CD6Q53TS8 623 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 FUKQ8N0W3 1084 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms