RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 KRT13P13646 458 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 ENPEPQ07075 957 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 LHX8Q68G74 356 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 SLC39A4Q6P5W5 647 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 SRGAP1Q7Z6B7 1085 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 PPFIBP1Q86W92 1011 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 ARRDC4Q8NCT1 418 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 FBXL18Q96ME1 805 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 ERGIC2Q96RQ1 377 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 ACO2Q99798 780 aaKnown RBP13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 NUP58Q9BVL2 599 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 TARS2Q9BW92 718 aaKnown RBP13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 ADAMTS10Q9H324 1103 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 IFT122Q9HBG6 1241 aa13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 PRMT7Q9NVM4 692 aaPredicted RBP13.39□□□□□ -0.27
TGFBR3-211ENST00000533370 A0A087WZ62 844 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 A0A0B4J269 797 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 MOXD2PA6NHM9 499 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 TISP43B9A030 160 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 INO80B-WBP1J3KQ70 363 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 TREHO43280 583 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 LDHAP00338 332 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 AFPP02771 609 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 VTNP04004 478 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 RPLP2P05387 115 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 TPM1P09493 284 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 GPC3P51654 580 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 NLRP11P59045 1033 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 MBTD1Q05BQ5 628 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 PTPN11Q06124 597 aaPredicted RBP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 KCNH2Q12809 1159 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 PRPF4BQ13523 1007 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 TRIM14Q14142 442 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 HIC1Q14526 733 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 PCBP1Q15365 356 aaKnown RBP eCLIP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 TAF2Q6P1X5 1199 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 TSHZ1Q6ZSZ6 1077 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 SESTD1Q86VW0 696 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 NLRP7Q8WX94 980 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 IQCDQ96DY2 449 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 PRIMPOLQ96LW4 560 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 FDXACB1Q9BRP7 624 aaPredicted RBP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 GCOM2Q9BZD3 368 aaPredicted RBP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 INO80BQ9C086 356 aaPredicted RBP13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 GTF2IRD1Q9UHL9 959 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 MYH11P35749 1972 aa13.38□□□□□ -0.27
TGFBR3-211ENST00000533370 ZNF233A6NK53 670 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 HAX1O00165 279 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 CLDN3O15551 220 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 EXTL3O43909 919 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 STX10O60499 249 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 GPR32O75388 356 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 TOM1L1O75674 476 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 ACLYP53396 1101 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 ZNF200P98182 395 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 NCBP1Q09161 790 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 RUFY4Q6ZNE9 571 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 USP37Q86T82 979 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 RSPH3Q86UC2 560 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 GPD1LQ8N335 351 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 RDH13Q8NBN7 331 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 CCDC150Q8NCX0 1101 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 TMC2Q8TDI7 906 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 SLC35C1Q96A29 364 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 TCHPQ9BT92 498 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 MSTO1Q9BUK6 570 aa13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 FAM49AQ9H0Q0 323 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 AGO2Q9UKV8 859 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-211ENST00000533370 GOLGA8IPA6NC78 632 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 GOLGA8JA6NMD2 632 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 AKR1B15C9JRZ8 316 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 MATR3P43243 847 aaKnown RBP eCLIP13.36□□□□□ -0.276e-6■■□□□ 12.4
TGFBR3-211ENST00000533370 VAMP7P51809 220 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 MCL1Q07820 350 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 RBL2Q08999 1139 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 BFSP1Q12934 665 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 SYCP1Q15431 976 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 PTPN21Q16825 1174 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 FIGNQ5HY92 759 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 ATF7IP2Q5U623 682 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 TCERG1LQ5VWI1 586 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 LRRC8AQ8IWT6 810 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 SH3TC2Q8TF17 1288 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 DNAJB3Q8WWF6 145 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 VTI1AQ96AJ9 217 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 ZNF668Q96K58 619 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 ZBTB45Q96K62 511 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 PCMTD1Q96MG8 357 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 FAM213AQ9BRX8 229 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 SEZ6LQ9BYH1 1024 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 EDEM3Q9BZQ6 932 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 MINDY3Q9H8M7 445 aa13.36□□□□□ -0.27
TGFBR3-211ENST00000533370 PTPRHQ9HD43 1115 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms