RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 NT5C3AQ9H0P0 336 aa16.18■□□□□ 0.18
CDC27-209ENST00000532893 MINDY3Q9H8M7 445 aa16.18■□□□□ 0.18
CDC27-209ENST00000532893 RXFP1Q9HBX9 757 aa16.18■□□□□ 0.18
CDC27-209ENST00000532893 CNTNAP2Q9UHC6 1331 aa16.18■□□□□ 0.18
CDC27-209ENST00000532893 DOCK8Q8NF50 2099 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 ANHXE9PGG2 379 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 F8W810 466 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 AKAP17AQ02040 695 aaKnown RBP16.17■□□□□ 0.18
CDC27-209ENST00000532893 HTR4Q13639 388 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 PLA2G4FQ68DD2 849 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 ANO5Q75V66 913 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 GET4Q7L5D6 327 aaPredicted RBP16.17■□□□□ 0.18
CDC27-209ENST00000532893 CNTNAP3BQ96NU0 1288 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 JPH2Q9BR39 696 aaPredicted RBP16.17■□□□□ 0.18
CDC27-209ENST00000532893 RPP25Q9BUL9 199 aaKnown RBP16.17■□□□□ 0.18
CDC27-209ENST00000532893 CNTNAP3Q9BZ76 1288 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 PLEKHA4Q9H4M7 779 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 SLC2A4RGQ9NR83 387 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 COL4A3BPQ9Y5P4 624 aa16.17■□□□□ 0.18
CDC27-209ENST00000532893 KINO60870 393 aaKnown RBP16.16■□□□□ 0.18
CDC27-209ENST00000532893 EFEMP2O95967 443 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 ITGA4P13612 1032 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 CPA1P15085 419 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 NCLP19338 710 aaKnown RBP16.16■□□□□ 0.18
CDC27-209ENST00000532893 NPEPPSP55786 919 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 DSG1Q02413 1049 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 TSGA10IPQ3SY00 556 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 Q4G0T1 1027 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 B3GNT9Q6UX72 402 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 SRGAP1Q7Z6B7 1085 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 GLYCTKQ8IVS8 523 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 RNF168Q8IYW5 571 aaPredicted RBP16.16■□□□□ 0.18
CDC27-209ENST00000532893 MAML2Q8IZL2 1156 aaPredicted RBP16.16■□□□□ 0.18
CDC27-209ENST00000532893 SMG8Q8ND04 991 aaKnown RBP16.16■□□□□ 0.18
CDC27-209ENST00000532893 PJA1Q8NG27 643 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 TBCKQ8TEA7 893 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 HDAC7Q8WUI4 952 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 PRPF31Q8WWY3 499 aaKnown RBP16.16■□□□□ 0.18
CDC27-209ENST00000532893 TMEM143Q96AN5 459 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 B3GALT6Q96L58 329 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 PRKD2Q9BZL6 878 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 MIOSQ9NXC5 875 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 VPS54Q9P1Q0 977 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 NUMBLQ9Y6R0 609 aa16.16■□□□□ 0.18
CDC27-209ENST00000532893 ARL5CA6NH57 179 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 TGM5O43548 720 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 STARD6P59095 220 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 PSMC5P62195 406 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 GPC5P78333 572 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
CDC27-209ENST00000532893 CCDC148Q8NFR7 591 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 SHDQ96IW2 340 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 GAD1Q99259 594 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 UBN1Q9NPG3 1134 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 CHST7Q9NS84 486 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 ZDHHC7Q9NXF8 308 aa16.15■□□□□ 0.18
CDC27-209ENST00000532893 ACACBO00763 2458 aa16.14■□□□□ 0.18
CDC27-209ENST00000532893 PAPLNO95428 1278 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 TDP2O95551 362 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 SCNN1GP51170 649 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 DSC1Q08554 894 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 LAMTOR4Q0VGL1 99 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 SNW1Q13573 536 aaKnown RBP16.14■□□□□ 0.17
CDC27-209ENST00000532893 VARS2Q5ST30 1063 aaKnown RBP16.14■□□□□ 0.17
CDC27-209ENST00000532893 LILRA6Q6PI73 481 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 Q6ZUG5 572 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 SLC7A3Q8WY07 619 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 BRF1Q92994 677 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 SLC26A6Q9BXS9 759 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 EIF2AQ9BY44 585 aaKnown RBP16.14■□□□□ 0.17
CDC27-209ENST00000532893 GPR62Q9BZJ7 368 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 SPATA6Q9NWH7 488 aaPredicted RBP16.14■□□□□ 0.17
CDC27-209ENST00000532893 IPPQ9Y573 584 aa16.14■□□□□ 0.17
CDC27-209ENST00000532893 KANSL1LA0AUZ9 987 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 EML1O00423 815 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 NR1I2O75469 434 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 HMGB1P09429 215 aaKnown RBP16.13■□□□□ 0.17
CDC27-209ENST00000532893 RPL17P18621 184 aaKnown RBP16.13■□□□□ 0.17
CDC27-209ENST00000532893 FSHRP23945 695 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 MLH1P40692 756 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 NLRP5P59047 1200 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 KRT32Q14532 448 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 PARM1Q6UWI2 310 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 CNNM3Q8NE01 707 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 ETNPPLQ8TBG4 499 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 PSPC1Q8WXF1 523 aaKnown RBP16.13■□□□□ 0.17
CDC27-209ENST00000532893 FGF14Q92915 247 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 CEP170P1Q96L14 293 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 ZFP42Q96MM3 310 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 COLEC11Q9BWP8 271 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 BMP2KQ9NSY1 1161 aaPredicted RBP16.13■□□□□ 0.17
CDC27-209ENST00000532893 NCDNQ9UBB6 729 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 MTF2Q9Y483 593 aaPredicted RBP16.13■□□□□ 0.17
CDC27-209ENST00000532893 HES2Q9Y543 173 aa16.13■□□□□ 0.17
CDC27-209ENST00000532893 FANCMQ8IYD8 2048 aa16.12■□□□□ 0.17
CDC27-209ENST00000532893 DOCK6Q96HP0 2047 aa16.12■□□□□ 0.17
CDC27-209ENST00000532893 CYP3A7-CYP3A51PA0A087WV96 503 aa16.12■□□□□ 0.17
CDC27-209ENST00000532893 LAMTOR5O43504 91 aa16.12■□□□□ 0.17
CDC27-209ENST00000532893 ZMYND10O75800 440 aa16.12■□□□□ 0.17
CDC27-209ENST00000532893 C1RP00736 705 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms