RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 GLULP15104 373 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 GLUD2P49448 558 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 RCAN1P53805 252 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 TOB2Q14106 344 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-208ENST00000529994 RSPO4Q2I0M5 234 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-208ENST00000529994 UBXN11Q5T124 520 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 DCLRE1AQ6PJP8 1040 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 ZNF707Q96C28 371 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-208ENST00000529994 TMEM175Q9BSA9 504 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 HERC2P3Q9BVR0 1158 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 MINDY3Q9H8M7 445 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 IFT122Q9HBG6 1241 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-208ENST00000529994 PDRG1Q9NUG6 133 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 STK39Q9UEW8 545 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 NUMBLQ9Y6R0 609 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 MAFO75444 373 aaPredicted RBP12.67□□□□□ -0.38
SF3B2-208ENST00000529994 PSMD10O75832 226 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 SRGAP2CP0DJJ0 459 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 PDIA3P30101 505 aaKnown RBP12.67□□□□□ -0.38
SF3B2-208ENST00000529994 HTR4Q13639 388 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 KIAA0319Q5VV43 1072 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 PHLDB3Q6NSJ2 640 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 ELMSAN1Q6PJG2 1045 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 MRPL10Q7Z7H8 261 aaKnown RBP12.67□□□□□ -0.38
SF3B2-208ENST00000529994 COLGALT2Q8IYK4 626 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 PJA1Q8NG27 643 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 BICD2Q8TD16 824 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 RPP25Q9BUL9 199 aaKnown RBP12.67□□□□□ -0.38
SF3B2-208ENST00000529994 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 DLL3Q9NYJ7 618 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 VPS54Q9P1Q0 977 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 COL4A3BPQ9Y5P4 624 aa12.67□□□□□ -0.38
SF3B2-208ENST00000529994 ACACBO00763 2458 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 CPLX1O14810 134 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
SF3B2-208ENST00000529994 GAS2O43903 313 aaKnown RBP12.66□□□□□ -0.38
SF3B2-208ENST00000529994 TDP2O95551 362 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 RPL17P18621 184 aaKnown RBP12.66□□□□□ -0.38
SF3B2-208ENST00000529994 HOXA11P31270 313 aaPredicted RBP12.66□□□□□ -0.38
SF3B2-208ENST00000529994 NPEPPSP55786 919 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 CYP26C1Q6V0L0 522 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 ANO5Q75V66 913 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 MAML2Q8IZL2 1156 aaPredicted RBP12.66□□□□□ -0.38
SF3B2-208ENST00000529994 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
SF3B2-208ENST00000529994 SUMF1Q8NBK3 374 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 SMG8Q8ND04 991 aaKnown RBP12.66□□□□□ -0.38
SF3B2-208ENST00000529994 TBCKQ8TEA7 893 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 TMEM143Q96AN5 459 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 GAD1Q99259 594 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.66□□□□□ -0.38
SF3B2-208ENST00000529994 DPP7Q9UHL4 492 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 SSX2IPQ9Y2D8 614 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 HES2Q9Y543 173 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 NID2Q14112 1375 aa12.66□□□□□ -0.38
SF3B2-208ENST00000529994 CNTNAP2Q9UHC6 1331 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 KMT2BQ9UMN6 2715 aaPredicted RBP12.65□□□□□ -0.38
SF3B2-208ENST00000529994 ANHXE9PGG2 379 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
SF3B2-208ENST00000529994 TGM5O43548 720 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 KINO60870 393 aaKnown RBP12.65□□□□□ -0.38
SF3B2-208ENST00000529994 DTNBO60941 627 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 ITGA4P13612 1032 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 NCLP19338 710 aaKnown RBP12.65□□□□□ -0.38
SF3B2-208ENST00000529994 MLH1P40692 756 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 USP11P51784 963 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 GPC5P78333 572 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
SF3B2-208ENST00000529994 PARM1Q6UWI2 310 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 RDM1Q8NG50 284 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 PRPF31Q8WWY3 499 aaKnown RBP12.65□□□□□ -0.38
SF3B2-208ENST00000529994 RABGGTAQ92696 567 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 ZFP42Q96MM3 310 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 APOL6Q9BWW8 343 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 EIF2AQ9BY44 585 aaKnown RBP12.65□□□□□ -0.38
SF3B2-208ENST00000529994 RXFP1Q9HBX9 757 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 SPATA6Q9NWH7 488 aaPredicted RBP12.65□□□□□ -0.38
SF3B2-208ENST00000529994 MIOSQ9NXC5 875 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 NCDNQ9UBB6 729 aa12.65□□□□□ -0.38
SF3B2-208ENST00000529994 MTF2Q9Y483 593 aaPredicted RBP12.65□□□□□ -0.38
SF3B2-208ENST00000529994 PATJQ8NI35 1801 aa12.65□□□□□ -0.39
SF3B2-208ENST00000529994 ARL5CA6NH57 179 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 EML1O00423 815 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 FSHRP23945 695 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 SCNN1GP51170 649 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 NLRP5P59047 1200 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 NTHL1P78549 312 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 DSG1Q02413 1049 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 CSTF1Q05048 431 aaKnown RBP12.64□□□□□ -0.39
SF3B2-208ENST00000529994 SSRP1Q08945 709 aaKnown RBP12.64□□□□□ -0.39
SF3B2-208ENST00000529994 LAMTOR4Q0VGL1 99 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 UBXN2BQ14CS0 331 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 NTRK3Q16288 839 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 Q4G0T1 1027 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms