RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 MTSS1O43312 755 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 NDUFS2O75306 463 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 RAD17O75943 681 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 FOXL1Q12952 345 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 ODF1Q14990 250 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 NOMO1Q15155 1222 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 C19orf54Q5BKX5 351 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 EFCAB2Q5VUJ9 269 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 ZBTB46Q86UZ6 589 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 CHST13Q8NET6 341 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 TEKT5Q96M29 485 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 AASDHPPTQ9NRN7 309 aa7.69□□□□□ -1.18
PCF11-202ENST00000528336 PATE3B3GLJ2 98 aa7.68□□□□□ -1.18
PCF11-202ENST00000528336 ZNF623O75123 536 aa7.68□□□□□ -1.18
PCF11-202ENST00000528336 ALDH1L1O75891 902 aa7.68□□□□□ -1.18
PCF11-202ENST00000528336 C5AR1P21730 350 aa7.68□□□□□ -1.18
PCF11-202ENST00000528336 MCAMP43121 646 aa7.68□□□□□ -1.18
PCF11-202ENST00000528336 FAM111BQ6SJ93 734 aa7.68□□□□□ -1.18
PCF11-202ENST00000528336 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.68□□□□□ -1.18
PCF11-202ENST00000528336 Q8TCH9 128 aa7.68□□□□□ -1.18
PCF11-202ENST00000528336 EPC1Q9H2F5 836 aa7.68□□□□□ -1.18
PCF11-202ENST00000528336 DEF6Q9H4E7 631 aa7.68□□□□□ -1.18
PCF11-202ENST00000528336 RBM12Q9NTZ6 932 aaKnown RBP7.68□□□□□ -1.18
PCF11-202ENST00000528336 RB1CC1Q8TDY2 1594 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 NRP1O14786 923 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 STC2O76061 302 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 SNUPNO95149 360 aaKnown RBP7.67□□□□□ -1.18
PCF11-202ENST00000528336 NEK2P51955 445 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 WNT3AP56704 352 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 PPP3CAQ08209 521 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 FAM180AQ6UWF9 173 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 D2HGDHQ8N465 521 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 DNERQ8NFT8 737 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 NRG4Q8WWG1 115 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 DPF2Q92785 391 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 CHMP4CQ96CF2 233 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 C8orf49Q96NF6 230 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 SAMD11Q96NU1 681 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 SLC13A1Q9BZW2 595 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 MSL2Q9HCI7 577 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 SCOCQ9UIL1 159 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 TUBD1Q9UJT1 453 aa7.67□□□□□ -1.18
PCF11-202ENST00000528336 PHF2O75151 1096 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 ITGA10O75578 1167 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 GYPEP15421 78 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 TTF1Q15361 905 aaPredicted RBP7.66□□□□□ -1.18
PCF11-202ENST00000528336 FAM214AQ32MH5 1076 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 ZNF585AQ6P3V2 769 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 ZNF480Q8WV37 535 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 SSH1Q8WYL5 1049 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 CDC5LQ99459 802 aaKnown RBP7.66□□□□□ -1.18
PCF11-202ENST00000528336 KRTAP9-9Q9BYP9 154 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 KRTAP9-4Q9BYQ2 154 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 SMPD4Q9NXE4 827 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 GPRC5DQ9NZD1 345 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 INTUQ9ULD6 942 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 LUC7L2Q9Y383 392 aaKnown RBP7.66□□□□□ -1.18
PCF11-202ENST00000528336 SH3BP1Q9Y3L3 701 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 SLC30A1Q9Y6M5 507 aa7.66□□□□□ -1.18
PCF11-202ENST00000528336 COMTP21964 271 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 ECHS1P30084 290 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 PER3P56645 1201 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 KIF23Q02241 960 aaPredicted RBP7.65□□□□□ -1.18
PCF11-202ENST00000528336 PLEKHG6Q3KR16 790 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 FKBP15Q5T1M5 1219 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 Q6ZVL8 140 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 POLNQ7Z5Q5 900 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 SGMS1Q86VZ5 419 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 LILRA3Q8N6C8 439 aaPredicted RBP7.65□□□□□ -1.18
PCF11-202ENST00000528336 REPS2Q8NFH8 660 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 FBXO18Q8NFZ0 1043 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 MDM1Q8TC05 714 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 HOOK2Q96ED9 719 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 WWC2-AS2Q96NR7 200 aa7.65□□□□□ -1.18
PCF11-202ENST00000528336 UHRF1Q96T88 793 aaPredicted RBP7.65□□□□□ -1.18
PCF11-202ENST00000528336 ADCY6O43306 1168 aa7.64□□□□□ -1.19
PCF11-202ENST00000528336 ACO1P21399 889 aaKnown RBP7.64□□□□□ -1.19
PCF11-202ENST00000528336 RECQLP46063 649 aaPredicted RBP7.64□□□□□ -1.19
PCF11-202ENST00000528336 KRT85P78386 507 aa7.64□□□□□ -1.19
PCF11-202ENST00000528336 APBA1Q02410 837 aa7.64□□□□□ -1.19
PCF11-202ENST00000528336 HHEXQ03014 270 aa7.64□□□□□ -1.19
PCF11-202ENST00000528336 HS1BP3Q53T59 392 aa7.64□□□□□ -1.19
PCF11-202ENST00000528336 LCE4AQ5TA78 99 aa7.64□□□□□ -1.19
PCF11-202ENST00000528336 THEMISQ8N1K5 641 aaPredicted RBP7.64□□□□□ -1.19
PCF11-202ENST00000528336 IL17RAQ96F46 866 aa7.64□□□□□ -1.19
PCF11-202ENST00000528336 ZNF512Q96ME7 567 aaPredicted RBP7.64□□□□□ -1.19
PCF11-202ENST00000528336 ENKD1Q9H0I2 346 aa7.64□□□□□ -1.19
PCF11-202ENST00000528336 CD248Q9HCU0 757 aa7.64□□□□□ -1.19
PCF11-202ENST00000528336 CNOT11Q9UKZ1 510 aaKnown RBP7.64□□□□□ -1.19
PCF11-202ENST00000528336 ZMYM3Q14202 1370 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 HOXA3O43365 443 aaPredicted RBP7.63□□□□□ -1.19
PCF11-202ENST00000528336 PTPN7P35236 360 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 GZMKP49863 264 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 MRPL49Q13405 166 aaKnown RBP7.63□□□□□ -1.19
PCF11-202ENST00000528336 SEPT2Q15019 361 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 MST1LQ2TV78 715 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 ODR4Q5SWX8 454 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 Q6ZSN1 163 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 ELOA2Q8IYF1 753 aaPredicted RBP7.63□□□□□ -1.19
PCF11-202ENST00000528336 PQLC1Q8N2U9 271 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms