RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 RSPO4Q2I0M5 234 aaPredicted RBP14.56□□□□□ -0.08
CLNS1A-207ENST00000527133 B3GNT9Q6UX72 402 aa14.56□□□□□ -0.08
CLNS1A-207ENST00000527133 COLGALT2Q8IYK4 626 aa14.56□□□□□ -0.08
CLNS1A-207ENST00000527133 TBCKQ8TEA7 893 aa14.56□□□□□ -0.08
CLNS1A-207ENST00000527133 B3GALT6Q96L58 329 aa14.56□□□□□ -0.08
CLNS1A-207ENST00000527133 NT5C3AQ9H0P0 336 aa14.56□□□□□ -0.08
CLNS1A-207ENST00000527133 MINDY3Q9H8M7 445 aa14.56□□□□□ -0.08
CLNS1A-207ENST00000527133 SLC2A4RGQ9NR83 387 aa14.56□□□□□ -0.08
CLNS1A-207ENST00000527133 FANCMQ8IYD8 2048 aa14.56□□□□□ -0.08
CLNS1A-207ENST00000527133 ARL5CA6NH57 179 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 TGM5O43548 720 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 GAS2O43903 313 aaKnown RBP14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 KINO60870 393 aaKnown RBP14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 ITGA4P13612 1032 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 CPA1P15085 419 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 NCLP19338 710 aaKnown RBP14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 MLH1P40692 756 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 NPEPPSP55786 919 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 PSMC5P62195 406 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 DSG1Q02413 1049 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 KRT32Q14532 448 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 Q4G0T1 1027 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 SRGAP1Q7Z6B7 1085 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 GLYCTKQ8IVS8 523 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 RNF168Q8IYW5 571 aaPredicted RBP14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 MAML2Q8IZL2 1156 aaPredicted RBP14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 SUMF1Q8NBK3 374 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 SMG8Q8ND04 991 aaKnown RBP14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 HDAC7Q8WUI4 952 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 PRPF31Q8WWY3 499 aaKnown RBP14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 SLC7A3Q8WY07 619 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 TMEM143Q96AN5 459 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 CNTNAP3BQ96NU0 1288 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 GAD1Q99259 594 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 SLC26A6Q9BXS9 759 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 CNTNAP3Q9BZ76 1288 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 PLEKHA4Q9H4M7 779 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 UBN1Q9NPG3 1134 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 BMP2KQ9NSY1 1161 aaPredicted RBP14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 ZDHHC7Q9NXF8 308 aa14.55□□□□□ -0.08
CLNS1A-207ENST00000527133 ACACBO00763 2458 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 KMT2BQ9UMN6 2715 aaPredicted RBP14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 ZFHX4Q86UP3 3567 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 KRT37O76014 449 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 PAPLNO95428 1278 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 EFEMP2O95967 443 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 HMGB1P09429 215 aaKnown RBP14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 NLRP5P59047 1200 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 LAMTOR4Q0VGL1 99 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 TSGA10IPQ3SY00 556 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 Q6ZUG5 572 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 PSPC1Q8WXF1 523 aaKnown RBP14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 BRF1Q92994 677 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 SHDQ96IW2 340 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 ZFP42Q96MM3 310 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 YTHDC1Q96MU7 727 aaKnown RBP14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 RPP25Q9BUL9 199 aaKnown RBP14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 PRKD2Q9BZL6 878 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 NCDNQ9UBB6 729 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 IPPQ9Y573 584 aa14.54□□□□□ -0.08
CLNS1A-207ENST00000527133 NID2Q14112 1375 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 NR1I2O75469 434 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 RPL17P18621 184 aaKnown RBP14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 FSHRP23945 695 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 SCNN1GP51170 649 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 STARD6P59095 220 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 GPC5P78333 572 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 DSC1Q08554 894 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 SNW1Q13573 536 aaKnown RBP14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 CNNM3Q8NE01 707 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 ETNPPLQ8TBG4 499 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 FGF14Q92915 247 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 CEP170P1Q96L14 293 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 COLEC11Q9BWP8 271 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 APOL6Q9BWW8 343 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 EIF2AQ9BY44 585 aaKnown RBP14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 RNF26Q9BY78 433 aaPredicted RBP14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 CHST7Q9NS84 486 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 SPATA6Q9NWH7 488 aaPredicted RBP14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 MIOSQ9NXC5 875 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 HES2Q9Y543 173 aa14.53□□□□□ -0.08
CLNS1A-207ENST00000527133 COL4A3Q01955 1670 aa14.52□□□□□ -0.08
CLNS1A-207ENST00000527133 CYP3A7-CYP3A51PA0A087WV96 503 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 EML1O00423 815 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 LAMTOR5O43504 91 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 ERLIN2O94905 339 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 CYP3A7P24462 503 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 QARSP47897 775 aaKnown RBP14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 NTRK3Q16288 839 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 USP41Q3LFD5 358 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 VARS2Q5ST30 1063 aaKnown RBP14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 FUT10Q6P4F1 479 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 LILRA6Q6PI73 481 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 PARM1Q6UWI2 310 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 GRASPQ7Z6J2 395 aaPredicted RBP14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 RNF149Q8NC42 400 aa14.52□□□□□ -0.09
CLNS1A-207ENST00000527133 BCO2Q9BYV7 579 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms