RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 PGBD3Q8N328 593 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 DTWD2Q8NBA8 298 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 TMEM87AQ8NBN3 555 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 TMEM40Q8WWA1 233 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 RRP36Q96EU6 259 aaKnown RBP8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 ZNF558Q96NG5 402 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 RUBCNLQ9H714 662 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 JADE2Q9NQC1 790 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 CYP26B1Q9NR63 512 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 DIAPH3Q9NSV4 1193 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 SPG21Q9NZD8 308 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 SLC9A2Q9UBY0 812 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 UBIAD1Q9Y5Z9 338 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 ZFHX4Q86UP3 3567 aa8.5□□□□□ -1.05
CLNS1A-205ENST00000526009 FNDC1Q4ZHG4 1894 aaPredicted RBP8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 SPDYE3A6NKU9 549 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 HIP1O00291 1037 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 HBP1O60381 514 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 CLASP2O75122 1294 aaKnown RBP8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 CXCL14O95715 111 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 EOMESO95936 686 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 WEE1P30291 646 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 CA8P35219 290 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 TXLNAP40222 546 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 PBX3P40426 434 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 SLC26A2P50443 739 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 ACTR2P61160 394 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 TDGQ13569 410 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 WTAPQ15007 396 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 RARS2Q5T160 578 aaKnown RBP8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 CATIPQ7Z7H3 387 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 FAM228AQ86W67 206 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 KIAA2013Q8IYS2 634 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 KIAA0319LQ8IZA0 1049 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 LRRC43Q8N309 656 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 C12orf76Q8N812 135 aaPredicted RBP8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 ACSF2Q96CM8 615 aaPredicted RBP8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 CASD1Q96PB1 797 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 SDF4Q9BRK5 362 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 LNPKQ9C0E8 428 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 PSTPIP2Q9H939 334 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 KCNH7Q9NS40 1196 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 SEC63Q9UGP8 760 aaKnown RBP8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 FBXL21Q9UKT6 434 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 CACNA1BQ00975 2339 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 DMXL1Q9Y485 3027 aa8.49□□□□□ -1.05
CLNS1A-205ENST00000526009 EML1O00423 815 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 ZSCAN20P17040 1043 aaPredicted RBP8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 SMARCA1P28370 1054 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 CRYBB1P53674 252 aaPredicted RBP8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 SART3Q15020 963 aaKnown RBP8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 KIZQ2M2Z5 673 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 KANK3Q6NY19 840 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 OTOP3Q7RTS5 596 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 SLC39A11Q8N1S5 342 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 VWA5B2Q8N398 1253 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 OSMRQ99650 979 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 MXRA8Q9BRK3 442 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 C2orf49Q9BVC5 232 aaPredicted RBP8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 SPZ1Q9BXG8 430 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 DZANK1Q9NVP4 752 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 CUEDC1Q9NWM3 386 aaPredicted RBP8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 PCDHA6Q9UN73 950 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 DUSP12Q9UNI6 340 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 PCDHA8Q9Y5H6 950 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 LOXHD1Q8IVV2 1947 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 NFASCO94856 1347 aa8.48□□□□□ -1.05
CLNS1A-205ENST00000526009 LAMA4Q16363 1823 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 NT5C1B-RDH14C9J2C7 533 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 H3BM21 787 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 KRT37O76014 449 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 ARP10275 920 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 EPCAMP16422 314 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 KIF5BP33176 963 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 ALDH7A1P49419 539 aaKnown RBP8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 METAP2P50579 478 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 HDAC1Q13547 482 aaPredicted RBP8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 GIT2Q14161 759 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 DSC3Q14574 896 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 ZNF484Q5JVG2 852 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 TMC5Q6UXY8 1006 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 CCDC149Q6ZUS6 474 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 RALYLQ86SE5 291 aaKnown RBP8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 NPAS3Q8IXF0 933 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 VPS52Q8N1B4 723 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 CTCFLQ8NI51 663 aaPredicted RBP8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 CYP2W1Q8TAV3 490 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 TMEM169Q96HH4 297 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 PPP1R16BQ96T49 567 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 MAP3K14Q99558 947 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 LZTS2Q9BRK4 669 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 KCNK12Q9HB15 430 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 NEUROD4Q9HD90 331 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 DLL3Q9NYJ7 618 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 COL1A2P08123 1366 aa8.47□□□□□ -1.05
CLNS1A-205ENST00000526009 IGKV6D-21A0A0A0MT36 114 aa8.46□□□□□ -1.06
CLNS1A-205ENST00000526009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.46□□□□□ -1.06
CLNS1A-205ENST00000526009 GPR32O75388 356 aa8.46□□□□□ -1.06
CLNS1A-205ENST00000526009 VTNP04004 478 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms