RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 GABPB2Q8TAK5 448 aaPredicted RBP13.99□□□□□ -0.17
PCDHGB1-201ENST00000523390 IL17RAQ96F46 866 aa13.99□□□□□ -0.17
PCDHGB1-201ENST00000523390 ERGIC2Q96RQ1 377 aa13.99□□□□□ -0.17
PCDHGB1-201ENST00000523390 SYNGAP1Q96PV0 1343 aa13.99□□□□□ -0.17
PCDHGB1-201ENST00000523390 FAM86B1E9PN63 330 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 ZNF185O15231 689 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 EIF3DO15371 548 aaKnown RBP eCLIP13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 FAM86B2P0C5J1 330 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 SLC12A2P55011 1212 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 GIT2Q14161 759 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 PSMC1P62191 440 aaKnown RBP13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 BBS9Q3SYG4 887 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 ENOSF1Q7L5Y1 443 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 MAGED2Q9UNF1 606 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 GH1P01241 217 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 PLEKP08567 350 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 C6orf222P0C671 652 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 SAT1P21673 171 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 TBK1Q9UHD2 729 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 I3L4J1 428 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 CALB1P05937 261 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 MXD4Q14582 209 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 PNMA5Q96PV4 448 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 KIAA1683Q9H0B3 1180 aa13.98□□□□□ -0.17
PCDHGB1-201ENST00000523390 CACNA1FO60840 1977 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 TCF7P36402 384 aaPredicted RBP13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 PMS1P54277 932 aaKnown RBP13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 CC2D1AQ6P1N0 951 aaPredicted RBP13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 WHAMMQ8TF30 809 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 ATP2A3Q93084 1043 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 PI4K2AQ9BTU6 479 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 EMBQ6PCB8 327 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 MKNK1Q9BUB5 465 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 PIN4Q9Y237 131 aaKnown RBP13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 LPXNO60711 386 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 ACSL3O95573 720 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 NCOA4Q13772 614 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 CENPPQ6IPU0 288 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 IGSF9BQ9UPX0 1349 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 TADA3O75528 432 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 OATP04181 439 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 EPHX2P34913 555 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 ZNF131P52739 623 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 AGAP1Q9UPQ3 857 aa13.97□□□□□ -0.17
PCDHGB1-201ENST00000523390 ZBED1O96006 694 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 CTSHP09668 335 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 CETPP11597 493 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 SEZ6Q53EL9 994 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 KLHDC7AQ5VTJ3 777 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 MFSD14CQ5VZR4 134 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 SPATA4Q8NEY3 305 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 SCFD1Q8WVM8 642 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 GLIS2Q9BZE0 524 aaPredicted RBP13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 INTS9Q9NV88 658 aaKnown RBP13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 SNX12Q9UMY4 172 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 HLA-DRAP01903 254 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 INHBAP08476 426 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 Q4G0T1 1027 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 EPC2Q52LR7 807 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 GPATCH11Q8N954 259 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 ACAP3Q96P50 834 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 CBWD1Q9BRT8 395 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 GOLPH3Q9H4A6 298 aa13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 MKRN1Q9UHC7 482 aaKnown RBP13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 NOC2LQ9Y3T9 749 aaKnown RBP13.96□□□□□ -0.17
PCDHGB1-201ENST00000523390 A8MXQ7 604 aa13.96□□□□□ -0.18
PCDHGB1-201ENST00000523390 FOXP2O15409 715 aa13.96□□□□□ -0.18
PCDHGB1-201ENST00000523390 FKBP1AP62942 108 aaKnown RBP13.96□□□□□ -0.18
PCDHGB1-201ENST00000523390 NNTQ13423 1086 aa13.96□□□□□ -0.18
PCDHGB1-201ENST00000523390 EFCAB12Q6NXP0 572 aa13.96□□□□□ -0.18
PCDHGB1-201ENST00000523390 PNMA8AQ86V59 439 aaPredicted RBP13.96□□□□□ -0.18
PCDHGB1-201ENST00000523390 KCTD17Q8N5Z5 321 aa13.96□□□□□ -0.18
PCDHGB1-201ENST00000523390 KIAA0895Q8NCT3 520 aa13.96□□□□□ -0.18
PCDHGB1-201ENST00000523390 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.18
PCDHGB1-201ENST00000523390 CHD2O14647 1828 aaKnown RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 VIL1P09327 827 aaKnown RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 SCP2P22307 547 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 KCNK18Q7Z418 384 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 PXMP2Q9NR77 195 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 TTC7AQ9ULT0 858 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 NOVA2Q9UNW9 492 aaKnown RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 ADM5C9JUS6 153 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 ADORA2BP29275 332 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 RFC5P40937 340 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 ERVK-24P63145 666 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 CUL1Q13616 776 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 ARHGEF18Q6ZSZ5 1173 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 CBWD2Q8IUF1 395 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 CACNA2D3Q8IZS8 1091 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 DNAAF3Q8N9W5 541 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 RDM1Q8NG50 284 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 CPA5Q8WXQ8 436 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 SMARCAL1Q9NZC9 954 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 STRIP2Q9ULQ0 834 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms