RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 SLC13A5Q86YT5 568 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-212ENST00000523387 RNF217Q8TC41 542 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF483Q8TF39 744 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-212ENST00000523387 DNAJC19Q96DA6 116 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 DYDC2Q96IM9 177 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF570Q96NI8 536 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ADAM22Q9P0K1 906 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ANAPC7Q9UJX3 599 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 STK24Q9Y6E0 443 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 TMEM94Q12767 1356 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L10C9JJH3 530 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 DDX39AO00148 427 aaKnown RBP9.65□□□□□ -0.86
CSMD1-212ENST00000523387 MARK3P27448 753 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 GCLMP48507 274 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ITGA8P53708 1063 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 BLMHQ13867 455 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 TBC1D10BQ4KMP7 808 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-212ENST00000523387 TMEM119Q4V9L6 283 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 CYFIP1Q7L576 1253 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 RASGEF1CQ8N431 466 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 CCDC89Q8N998 374 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 KRT35Q92764 455 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 MTMR9Q96QG7 549 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 TRABDQ9H4I3 376 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 NPHS2Q9NP85 383 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 APEX2Q9UBZ4 518 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 TTC7AQ9ULT0 858 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ESYT2A0FGR8 921 aa9.65□□□□□ -0.87
CSMD1-212ENST00000523387 CCDC189A1A4V9 331 aa9.65□□□□□ -0.87
CSMD1-212ENST00000523387 SLC16A3O15427 465 aaKnown RBP9.65□□□□□ -0.87
CSMD1-212ENST00000523387 ECHS1P30084 290 aa9.65□□□□□ -0.87
CSMD1-212ENST00000523387 SERPINB4P48594 390 aa9.65□□□□□ -0.87
CSMD1-212ENST00000523387 ICA1Q05084 483 aa9.65□□□□□ -0.87
CSMD1-212ENST00000523387 PDCD2Q16342 344 aaPredicted RBP9.65□□□□□ -0.87
CSMD1-212ENST00000523387 DDB1Q16531 1140 aa9.65□□□□□ -0.87
CSMD1-212ENST00000523387 SYT2Q8N9I0 419 aaPredicted RBP9.65□□□□□ -0.87
CSMD1-212ENST00000523387 UBN1Q9NPG3 1134 aa9.65□□□□□ -0.87
CSMD1-212ENST00000523387 ARHGAP42A6NI28 874 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 RSPH10B2B2RC85 870 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 UNC5CO95185 931 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 RSPH10BP0C881 870 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 ITIH2P19823 946 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 EPHB2P29323 1055 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 PRKCIP41743 596 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 BNIP1Q12981 228 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 MAP7Q14244 749 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 GPATCH4Q5T3I0 446 aaKnown RBP9.64□□□□□ -0.87
CSMD1-212ENST00000523387 IZUMO3Q5VZ72 239 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 TTBK2Q6IQ55 1244 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 ADGRF4Q8IZF3 695 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 STK32AQ8WU08 396 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 ALG3Q92685 438 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 BICD1Q96G01 975 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 MAGEB18Q96M61 343 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 RILPQ96NA2 401 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 GPR101Q96P66 508 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-212ENST00000523387 FAM118BQ9BPY3 351 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 PHTF1Q9UMS5 762 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 C4AP0C0L4 1744 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 C4BP0C0L5 1744 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 MXI1P50539 228 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 CAV1Q03135 178 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 DYNC1I2Q13409 638 aaKnown RBP9.64□□□□□ -0.87
CSMD1-212ENST00000523387 STAT4Q14765 748 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 RCN1Q15293 331 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 LIN9Q5TKA1 542 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 TBC1D9BQ66K14 1250 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 TLDC1Q6P9B6 456 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 FBXO33Q7Z6M2 555 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 USP37Q86T82 979 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 FITM2Q8N6M3 262 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 RBM46Q8TBY0 533 aaKnown RBP9.64□□□□□ -0.87
CSMD1-212ENST00000523387 CKAP2Q8WWK9 683 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 ATG4AQ8WYN0 398 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 BTBD6Q96KE9 485 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 MYLK2Q9H1R3 596 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 ZBTB12Q9Y330 459 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-212ENST00000523387 CTDP1Q9Y5B0 961 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-212ENST00000523387 EME2A4GXA9 379 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-212ENST00000523387 GAS7O60861 476 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 MED24O75448 989 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 SMNDC1O75940 238 aaKnown RBP eCLIP9.64□□□□□ -0.87
CSMD1-212ENST00000523387 VHLP40337 213 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 RFC5P40937 340 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 CASP5P51878 434 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 ARHGAP4P98171 946 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 EPHA7Q15375 998 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 ZC2HC1CQ53FD0 456 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-212ENST00000523387 MIGA2Q7L4E1 593 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 SLC35C1Q96A29 364 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 ANKRD27Q96NW4 1050 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 RPS6KC1Q96S38 1066 aa9.64□□□□□ -0.87
CSMD1-212ENST00000523387 MYH13Q9UKX3 1938 aa9.63□□□□□ -0.87
CSMD1-212ENST00000523387 FOXO6A8MYZ6 492 aa9.63□□□□□ -0.87
CSMD1-212ENST00000523387 I3L4J1 428 aa9.63□□□□□ -0.87
CSMD1-212ENST00000523387 FOXN3O00409 490 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-212ENST00000523387 ZBTB5O15062 677 aa9.63□□□□□ -0.87
CSMD1-212ENST00000523387 AHCYL1O43865 530 aa9.63□□□□□ -0.87
CSMD1-212ENST00000523387 CREB3O43889 395 aa9.63□□□□□ -0.87
CSMD1-212ENST00000523387 CBX6O95503 412 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms