RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 CMASQ8NFW8 434 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 OXER1Q8TDS5 423 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 FAM20AQ96MK3 541 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 ZFP42Q96MM3 310 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 FAM193BQ96PV7 902 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 GAD1Q99259 594 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 LXNQ9BS40 222 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 PHF20Q9BVI0 1012 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 HERC2P3Q9BVR0 1158 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 XPNPEP1Q9NQW7 623 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 KANSL3Q9P2N6 904 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 HES2Q9Y543 173 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 IPPQ9Y573 584 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 EP300Q09472 2414 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 C2orf16Q68DN1 1984 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 CCDC195A0A1B0GUA6 201 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 ARL5CA6NH57 179 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 CPLX1O14810 134 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 INPPL1O15357 1258 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 TSPAN1O60635 241 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 URODP06132 367 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 SPATA31D3P0C874 917 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 MLH1P40692 756 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 RFC5P40937 340 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 OR1G1P47890 313 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 DSC1Q08554 894 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 SPIRE1Q08AE8 756 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 PPP4R3AQ6IN85 833 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 SPATA31D4Q6ZUB0 917 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 NEK8Q86SG6 692 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 C4orf19Q8IY42 314 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 CCDC105Q8IYK2 499 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 ZNF707Q96C28 371 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 DYDC2Q96IM9 177 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 CPB2Q96IY4 423 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 B3GALT6Q96L58 329 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 MYADMQ96S97 322 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 STK39Q9UEW8 545 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 CYP46A1Q9Y6A2 500 aa17.05■□□□□ 0.32
TRAPPC9-213ENST00000522504 KRBA1A5PL33 1030 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 FAM205CA6NFA0 338 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 ITGA4P13612 1032 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 SCNN1GP51170 649 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 PTENP60484 403 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 CYP4A11Q02928 519 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 CTTNQ14247 550 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 EPHA7Q15375 998 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 XKR9Q5GH70 373 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 NKD2Q969F2 451 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 RXFP1Q9HBX9 757 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 FBXL21Q9UKT6 434 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 PPME1Q9Y570 386 aa17.04■□□□□ 0.32
TRAPPC9-213ENST00000522504 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 CCNT1O60563 726 aaKnown RBP17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 REC8O95072 547 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 ADH1AP07327 375 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 CFHP08603 1231 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 GLUD2P49448 558 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 DSG1Q02413 1049 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 ANGPT1Q15389 498 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 AMHR2Q16671 573 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 NCAPH2Q6IBW4 605 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 PIK3AP1Q6ZUJ8 805 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 FAM177A1Q8N128 213 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 ADSSL1Q8N142 457 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 DTWD2Q8NBA8 298 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 GSTCDQ8NEC7 633 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 ST13P5Q8NFI4 369 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 ASAP3Q8TDY4 903 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 RABGGTAQ92696 567 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 IGSF9Q9P2J2 1179 aa17.03■□□□□ 0.32
TRAPPC9-213ENST00000522504 CLUHO75153 1309 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 CACNA1AO00555 2505 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 DKC1O60832 514 aaKnown RBP eCLIP17.02■□□□□ 0.326e-7■■■■■ 30.5
TRAPPC9-213ENST00000522504 SLITRK3O94933 977 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 GLUD1P00367 558 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 GBP2P32456 591 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 MBTD1Q05BQ5 628 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 SCRN1Q12765 414 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 PALB2Q86YC2 1186 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 EXOC8Q8IYI6 725 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 SLC44A3Q8N4M1 653 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 APOL6Q9BWW8 343 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 GPR62Q9BZJ7 368 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 NXF3Q9H4D5 531 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 ZSWIM4Q9H7M6 989 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 UBN1Q9NPG3 1134 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 EPS15L1Q9UBC2 864 aa17.02■□□□□ 0.32
TRAPPC9-213ENST00000522504 A0A087WWV3 80 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 TBX3O15119 743 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 ASAP2O43150 1006 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 B4GALT5O43286 388 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 GAS2O43903 313 aaKnown RBP17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 ERLIN2O94905 339 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 PAPLNO95428 1278 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 GCFC2P16383 781 aaKnown RBP17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 AKAP5P24588 427 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms