RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 PKN3Q6P5Z2 889 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 CYP26C1Q6V0L0 522 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 CYFIP1Q7L576 1253 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 RSPH3Q86UC2 560 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 VSIG10LQ86VR7 867 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 ZNF444Q8N0Y2 327 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 PNPLA1Q8N8W4 532 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 HELQQ8TDG4 1101 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 TMEM169Q96HH4 297 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 ZC3H10Q96K80 434 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 PDCD2LQ9BRP1 358 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 C1orf112Q9NSG2 853 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 KIAA1217Q5T5P2 1943 aa7.9□□□□□ -1.15
CTNNA1-216ENST00000519489 USP9YO00507 2555 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 SETD2Q9BYW2 2564 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 DENND3A2RUS2 1198 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 B4E1Z4 1266 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 CFBP00751 764 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 GALTP07902 379 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 RIPPLY3P57055 190 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 PPP2R5DQ14738 602 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 GRASPQ7Z6J2 395 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 FAM228AQ86W67 206 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 AMOTL1Q8IY63 956 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 TMEM87AQ8NBN3 555 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 STRBPQ96SI9 672 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 IER2Q9BTL4 223 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 PHF20Q9BVI0 1012 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 DKK4Q9UBT3 224 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 DNAJB4Q9UDY4 337 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 DNMT3LQ9UJW3 386 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 PCDHGC3Q9UN70 934 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 MRPS17Q9Y2R5 130 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 DOCK6Q96HP0 2047 aa7.89□□□□□ -1.15
CTNNA1-216ENST00000519489 CCDC171Q6TFL3 1326 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 NF1P21359 2839 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 C2CD2LO14523 706 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 RPS6KA5O75582 802 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 SLC11A1P49279 550 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 ALDH7A1P49419 539 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 SKOR1P84550 965 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 SP4Q02446 784 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 CREB5Q02930 508 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 CYP4F3Q08477 520 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 SEMA3BQ13214 749 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 GIT2Q14161 759 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 IER5Q5VY09 327 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 TANGO2Q6ICL3 276 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 ECHDC2Q86YB7 292 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 DCAF4Q8WV16 495 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 FAM3CQ92520 227 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 NRDE2Q9H7Z3 1164 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 HSPBP1Q9NZL4 362 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 ANKMY1Q9P2S6 941 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 STX8Q9UNK0 236 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 POLQO75417 2590 aa7.88□□□□□ -1.15
CTNNA1-216ENST00000519489 ITPR2Q14571 2701 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 NCANO14594 1321 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 GSTTP1A0A1W2PQM5 241 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 B8ZZF3 427 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 H0Y626 953 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 NOP56O00567 594 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 ZC3H11AO75152 810 aaKnown RBP eCLIP7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 BCAR3O75815 825 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 TRIM16O95361 564 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 TSPY3P0CV98 308 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 TSPY8P0CW00 308 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 TGFB3P10600 412 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 INSRRP14616 1297 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 FCARP24071 287 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 ABCG1P45844 678 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 KRT76Q01546 638 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 GRM2Q14416 872 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 PGM5Q15124 567 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 HIST2H2BCQ6DN03 193 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 LILRA6Q6PI73 481 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 METTL7BQ6UX53 244 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 ZNF280BQ86YH2 543 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 FMNL3Q8IVF7 1028 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 PLEKHM2Q8IWE5 1019 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 NPAS3Q8IXF0 933 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 ADAMTS14Q8WXS8 1223 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 PCYT2Q99447 389 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 DNAJC2Q99543 621 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 EMILIN2Q9BXX0 1053 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 PIDD1Q9HB75 910 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 GMPR2Q9P2T1 348 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 GINS2Q9Y248 185 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 ATG2BQ96BY7 2078 aa7.87□□□□□ -1.15
CTNNA1-216ENST00000519489 COL4A2P08572 1712 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 MEIS3P2A8K0S8 358 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 SPATA31C2B4DYI2 1134 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 J3QL48 77 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 TGM5O43548 720 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 SURF6O75683 361 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 GP1BBP13224 206 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 CCNE1P24864 410 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 CSRP3P50461 194 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 MRPS9P82933 396 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 TTF1Q15361 905 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms