RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 AMHR2Q16671 573 aa16.56■□□□□ 0.24
PDCD6-211ENST00000515587 FAM26FQ5R3K3 315 aa16.56■□□□□ 0.24
PDCD6-211ENST00000515587 SLC24A5Q71RS6 500 aa16.56■□□□□ 0.24
PDCD6-211ENST00000515587 ZNF720Q7Z2F6 126 aa16.56■□□□□ 0.24
PDCD6-211ENST00000515587 ATXN2LQ8WWM7 1075 aaKnown RBP16.56■□□□□ 0.24
PDCD6-211ENST00000515587 SLC9A7Q96T83 725 aa16.56■□□□□ 0.24
PDCD6-211ENST00000515587 RMND1Q9NWS8 449 aa16.56■□□□□ 0.24
PDCD6-211ENST00000515587 LRFN2Q9ULH4 789 aa16.56■□□□□ 0.24
PDCD6-211ENST00000515587 TBX20Q9UMR3 447 aa16.56■□□□□ 0.24
PDCD6-211ENST00000515587 EXOC7Q9UPT5 735 aa16.56■□□□□ 0.24
PDCD6-211ENST00000515587 B4GALT5O43286 388 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 MGEA5O60502 916 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 MBD3O95983 291 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 STAG3L1P0CL83 205 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 ARF4P18085 180 aaPredicted RBP16.55■□□□□ 0.24
PDCD6-211ENST00000515587 IBSPP21815 317 aaPredicted RBP16.55■□□□□ 0.24
PDCD6-211ENST00000515587 RAB27AP51159 221 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 GTF2BQ00403 316 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 KMT5BQ4FZB7 885 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 SLC27A1Q6PCB7 646 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 MYOCDQ8IZQ8 938 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 PHOSPHO2Q8TCD6 241 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 KCNN1Q92952 543 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 SMARCE1Q969G3 411 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 CPB2Q96IY4 423 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 ACCSQ96QU6 501 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 FIZ1Q96SL8 496 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 ADPGKQ9BRR6 497 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 TRIM6Q9C030 488 aaPredicted RBP16.55■□□□□ 0.24
PDCD6-211ENST00000515587 TTC3P53804 2025 aa16.55■□□□□ 0.24
PDCD6-211ENST00000515587 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 KLRC4O43908 158 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 ATP2A2P16615 1042 aaKnown RBP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 HOXA11P31270 313 aaPredicted RBP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 SARSP49591 514 aaKnown RBP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 LIG4P49917 911 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 ZC2HC1CQ53FD0 456 aaPredicted RBP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 ATF7IP2Q5U623 682 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 RASIP1Q5U651 963 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 RTN4RL1Q86UN2 441 aaPredicted RBP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 HACE1Q8IYU2 909 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 NECAB3Q96P71 396 aaPredicted RBP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 GSDMAQ96QA5 445 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 TCHPQ9BT92 498 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 ZBED2Q9BTP6 218 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 TRAIPQ9BWF2 469 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 GTPBP4Q9BZE4 634 aaKnown RBP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 CXXC1Q9P0U4 656 aaPredicted RBP16.54■□□□□ 0.24
PDCD6-211ENST00000515587 THEGQ9P2T0 379 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 PCDHB7Q9Y5E2 793 aa16.54■□□□□ 0.24
PDCD6-211ENST00000515587 PTPRSQ13332 1948 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 A0A1B0GUA9 196 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 HNRNPDLO14979 420 aaKnown RBP16.53■□□□□ 0.24
PDCD6-211ENST00000515587 EIF3DO15371 548 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDCD6-211ENST00000515587 MYBP10242 640 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 MATR3P43243 847 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDCD6-211ENST00000515587 DEFB103AP81534 67 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 KCNB1Q14721 858 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 DCAF4L1Q3SXM0 396 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 L1TD1Q5T7N2 865 aaKnown RBP16.53■□□□□ 0.24
PDCD6-211ENST00000515587 NT5DC1Q5TFE4 455 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 ZPBP2Q6X784 338 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 TAS1R3Q7RTX0 852 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 NPAS4Q8IUM7 802 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 SYCP3Q8IZU3 236 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 RNF169Q8NCN4 708 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 LINC01599Q8WXQ3 324 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 HPS3Q969F9 1004 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 PGBD4Q96DM1 585 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 ACO2Q99798 780 aaKnown RBP16.53■□□□□ 0.24
PDCD6-211ENST00000515587 TARS2Q9BW92 718 aaKnown RBP16.53■□□□□ 0.24
PDCD6-211ENST00000515587 PDZD7Q9H5P4 517 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 ZNF576Q9H609 170 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 TMEM206Q9H813 350 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 SLC39A2Q9NP94 309 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 FAM105AQ9NUU6 356 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 TNFSF13BQ9Y275 285 aa16.53■□□□□ 0.24
PDCD6-211ENST00000515587 UBE4BO95155 1302 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 A0A0U1RQF3 1178 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 C9IYK1 514 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 RHOBTB3O94955 611 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 UPP2O95045 317 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 KIF20AO95235 890 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 NPTXRO95502 500 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 DNAJB2P25686 324 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 FAM189BP81408 668 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 EHHADHQ08426 723 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 ECHDC2Q86YB7 292 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 MAP4K3Q8IVH8 894 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 NUP62CLQ9H1M0 184 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 CLSTN2Q9H4D0 955 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 ELAC1Q9H777 363 aaKnown RBP16.52■□□□□ 0.24
PDCD6-211ENST00000515587 TMEM161AQ9NX61 479 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 USP20Q9Y2K6 914 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 PCDHB2Q9Y5E7 798 aa16.52■□□□□ 0.24
PDCD6-211ENST00000515587 GBF1Q92538 1859 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.51■□□□□ 0.23
PDCD6-211ENST00000515587 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.51■□□□□ 0.23
PDCD6-211ENST00000515587 RBAK-RBAKDNI3L0D1 243 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms