RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MRIQ9BWK5 157 aa4.92□□□□□ -1.62
TOPBP1-208ENST00000511439 B3GALT1Q9Y5Z6 326 aa4.92□□□□□ -1.62
TOPBP1-208ENST00000511439 ATP7BP35670 1465 aa4.92□□□□□ -1.62
TOPBP1-208ENST00000511439 ZNF891A8MT65 544 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 SCDO00767 359 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 AMHP03971 560 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 GLRBP48167 497 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 IRF9Q00978 393 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 DHCR24Q15392 516 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 ZMAT1Q5H9K5 638 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 SPDYAQ5MJ70 313 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 BTBD8Q5XKL5 378 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 DDX46Q7L014 1031 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 DLG3Q92796 817 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 WWC2-AS2Q96NR7 200 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 CARD11Q9BXL7 1154 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 PRDM11Q9NQV5 511 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 RIC8BQ9NVN3 520 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 ZKSCAN5Q9Y2L8 839 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 PARP4Q9UKK3 1724 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 BRD4O60885 1362 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 CNTNAP1P78357 1384 aa4.91□□□□□ -1.62
TOPBP1-208ENST00000511439 TNRC6CQ9HCJ0 1690 aaKnown RBP4.9□□□□□ -1.62
TOPBP1-208ENST00000511439 DVL2O14641 736 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 GAS7O60861 476 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 C4BPAP04003 597 aaKnown RBP4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 ATP2A2P16615 1042 aaKnown RBP4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 POU3F3P20264 500 aaPredicted RBP4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 RAC3P60763 192 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 PHF19Q5T6S3 580 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 CREB3L3Q68CJ9 461 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 TCTN3Q6NUS6 607 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 STRA8Q7Z7C7 330 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 TCP11L2Q8N4U5 519 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 OR2W6PQ8NHA6 318 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 LRRC37BQ96QE4 947 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 MSL2Q9HCI7 577 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 KCNH7Q9NS40 1196 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 ZFR2Q9UPR6 939 aaKnown RBP4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 IQGAP3Q86VI3 1631 aa4.9□□□□□ -1.63
TOPBP1-208ENST00000511439 KCPQ6ZWJ8 1503 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 SBF2Q86WG5 1849 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 HIP1RO75146 1068 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 KRT37O76014 449 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 EYA4O95677 639 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 SLPIP03973 132 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 BPIP17213 487 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 NCLP19338 710 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 COMTP21964 271 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 CNGA1P29973 690 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 SDHAP31040 664 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 HERVK_113P62684 666 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 STRN3Q13033 797 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 CT47A1Q5JQC4 288 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 CC2D1AQ6P1N0 951 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 GPR155Q7Z3F1 870 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 ZFPM1Q8IX07 1006 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 CHTF18Q8WVB6 975 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 EDAQ92838 391 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 NEIL1Q96FI4 390 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 SCYL1Q96KG9 808 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 GNRHR2Q96P88 292 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 TACO1Q9BSH4 297 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 FAM126AQ9BYI3 521 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 PCED1AQ9H1Q7 454 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 SLITRK6Q9H5Y7 841 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 OXSMQ9NWU1 459 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 FBXO10Q9UK96 956 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 THRAP3Q9Y2W1 955 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 IGSF1Q8N6C5 1336 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 QSER1Q2KHR3 1735 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 BCL9O00512 1426 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 SSH2Q76I76 1423 aa4.89□□□□□ -1.63
TOPBP1-208ENST00000511439 H7C1D1 291 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 FOXS1O43638 330 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 ZEB2O60315 1214 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 ADCYAP1R1P41586 468 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 FXR1P51114 621 aaKnown RBP eCLIP4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 KIF11P52732 1056 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 AMPD3Q01432 767 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 DBPQ10586 325 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 SART3Q15020 963 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 ZNF174Q15697 407 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 PTPROQ16827 1216 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 PTF1AQ7RTS3 328 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 TAX1BP1Q86VP1 789 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 KIAA1958Q8N8K9 716 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 GPATCH3Q96I76 525 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 ADOQ96SZ5 270 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 ZNF341Q9BYN7 854 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 BRINP2Q9C0B6 783 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 ACSS2Q9NR19 701 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 THG1LQ9NWX6 298 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 H2AFY2Q9P0M6 372 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 ARHGAP28Q9P2N2 729 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 SPO11Q9Y5K1 396 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 COL4A3BPQ9Y5P4 624 aa4.88□□□□□ -1.63
TOPBP1-208ENST00000511439 PNPLA7Q6ZV29 1317 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms