RNA–Protein interactions for RNA: ENST00000511171.5

LEMD2-209, Transcript of LEM domain containing 2, humanhuman

TSL 2

Gene LEMD2, Length 4,870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-209ENST00000511171 IFT88Q13099 833 aa13.64□□□□□ -0.23
LEMD2-209ENST00000511171 PPP2R5DQ14738 602 aa13.64□□□□□ -0.23
LEMD2-209ENST00000511171 OR6B2Q6IFH4 312 aa13.64□□□□□ -0.23
LEMD2-209ENST00000511171 RNF149Q8NC42 400 aa13.64□□□□□ -0.23
LEMD2-209ENST00000511171 RNF25Q96BH1 459 aaPredicted RBP13.64□□□□□ -0.23
LEMD2-209ENST00000511171 SPATA33Q96N06 139 aa13.64□□□□□ -0.23
LEMD2-209ENST00000511171 SLITRK6Q9H5Y7 841 aa13.64□□□□□ -0.23
LEMD2-209ENST00000511171 WNT10BO00744 389 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 VCAM1P19320 739 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 NBPF12Q5TAG4 269 aaPredicted RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 SCYL3Q8IZE3 742 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 FAM149B1Q96BN6 582 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 MRPL4Q9BYD3 311 aaKnown RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 ZWILCHQ9H900 591 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 ADAMTS3O15072 1205 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 ATMINO43313 823 aaPredicted RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 SLITRK3O94933 977 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 PHBP35232 272 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 GABPAQ06546 454 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 EMC2Q15006 297 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 PAPD7Q5XG87 772 aaKnown RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 OTOP1Q7RTM1 612 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 TTLL3Q9Y4R7 772 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 TTI1O43156 1089 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 ITIH3Q06033 890 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 CCDC6Q16204 474 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 CCDC14Q49A88 953 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 RSRC2Q7L4I2 434 aaKnown RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 ENOSF1Q7L5Y1 443 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 FAM83AQ86UY5 434 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 PI4K2AQ9BTU6 479 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 FUT8Q9BYC5 575 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 PPP1R9AQ9ULJ8 1098 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 COL1A1P02452 1464 aaPredicted RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 STAMBPO95630 424 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 PLA2G4AP47712 749 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 CARSP49589 748 aaKnown RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 C6orf163Q5TEZ5 329 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 CCDC137Q6PK04 289 aaKnown RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 MAP7D3Q8IWC1 876 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 RBM46Q8TBY0 533 aaKnown RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 ZNF507Q8TCN5 953 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 SYTL5Q8TDW5 730 aaPredicted RBP13.63□□□□□ -0.23
LEMD2-209ENST00000511171 KCNMB3Q9NPA1 279 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
LEMD2-209ENST00000511171 CAPN9O14815 690 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 RAD51CO43502 376 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 PSMA2P25787 234 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 EIF3BP55884 814 aaKnown RBP13.62□□□□□ -0.23
LEMD2-209ENST00000511171 BEND6Q5SZJ8 279 aaPredicted RBP13.62□□□□□ -0.23
LEMD2-209ENST00000511171 OLFML3Q9NRN5 406 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 ANKEF1Q9NU02 776 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 FBXL5Q9UKA1 691 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 ALS2Q96Q42 1657 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 FOXN3O00409 490 aaPredicted RBP13.62□□□□□ -0.23
LEMD2-209ENST00000511171 TBXAS1P24557 533 aaPredicted RBP13.62□□□□□ -0.23
LEMD2-209ENST00000511171 SLC12A3P55017 1021 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 FKBP1AP62942 108 aaKnown RBP13.62□□□□□ -0.23
LEMD2-209ENST00000511171 CBWD2Q8IUF1 395 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 MMP19Q99542 508 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 TRIM51Q9BSJ1 452 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 WNT8AQ9H1J5 351 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 PPP1R11O60927 126 aaPredicted RBP13.62□□□□□ -0.23
LEMD2-209ENST00000511171 TMEM253P0C7T8 217 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 SCP2P22307 547 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 CHRNA3P32297 505 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 CASP5P51878 434 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 ZKSCAN8Q15776 578 aaPredicted RBP13.62□□□□□ -0.23
LEMD2-209ENST00000511171 EPC2Q52LR7 807 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 ZNF571Q7Z3V5 609 aaPredicted RBP13.62□□□□□ -0.23
LEMD2-209ENST00000511171 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 MMGT1Q8N4V1 131 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 HNRNPLLQ8WVV9 542 aaKnown RBP13.62□□□□□ -0.23
LEMD2-209ENST00000511171 C1orf54Q8WWF1 131 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 DNAJC19Q96DA6 116 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 MTMR8Q96EF0 704 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 HSD3B7Q9H2F3 369 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 HPCAL4Q9UM19 191 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 GPC3P51654 580 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 TTLL4Q14679 1199 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 CDO1Q16878 200 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 TRIM50Q86XT4 487 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 KCTD6Q8NC69 237 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 CPA5Q8WXQ8 436 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 TBX20Q9UMR3 447 aa13.62□□□□□ -0.23
LEMD2-209ENST00000511171 TRPM3Q9HCF6 1732 aaPredicted RBP13.61□□□□□ -0.23
LEMD2-209ENST00000511171 CIITAP33076 1130 aa13.61□□□□□ -0.23
LEMD2-209ENST00000511171 BACE1P56817 501 aa13.61□□□□□ -0.23
LEMD2-209ENST00000511171 YWHAGP61981 247 aaKnown RBP eCLIP13.61□□□□□ -0.23
LEMD2-209ENST00000511171 KCNA1Q09470 495 aa13.61□□□□□ -0.23
LEMD2-209ENST00000511171 MEA1Q16626 185 aa13.61□□□□□ -0.23
LEMD2-209ENST00000511171 LGSNQ5TDP6 509 aa13.61□□□□□ -0.23
LEMD2-209ENST00000511171 USP38Q8NB14 1042 aa13.61□□□□□ -0.23
LEMD2-209ENST00000511171 COMMD10Q9Y6G5 202 aa13.61□□□□□ -0.23
LEMD2-209ENST00000511171 RNF225M0QZC1 329 aaPredicted RBP13.61□□□□□ -0.23
LEMD2-209ENST00000511171 EPHB6O15197 1021 aa13.61□□□□□ -0.23
LEMD2-209ENST00000511171 MAFGO15525 162 aa13.61□□□□□ -0.23
LEMD2-209ENST00000511171 BASP1P80723 227 aaKnown RBP13.61□□□□□ -0.23
LEMD2-209ENST00000511171 TMED2Q15363 201 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms