RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 EPCAMP16422 314 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 ARF4P18085 180 aaPredicted RBP13.88□□□□□ -0.19
PDPN-208ENST00000509009 ITIH3Q06033 890 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 CES5AQ6NT32 575 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 KANK3Q6NY19 840 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 MAEAQ7L5Y9 396 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 BMP8AQ7Z5Y6 402 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 COLGALT2Q8IYK4 626 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 C12orf76Q8N812 135 aaPredicted RBP13.88□□□□□ -0.19
PDPN-208ENST00000509009 C4orf32Q8N8J7 132 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 CCDC43Q96MW1 224 aaKnown RBP13.88□□□□□ -0.19
PDPN-208ENST00000509009 POLR3FQ9H1D9 316 aaPredicted RBP13.88□□□□□ -0.19
PDPN-208ENST00000509009 GPRC5CQ9NQ84 441 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 DBR1Q9UK59 544 aaKnown RBP13.88□□□□□ -0.19
PDPN-208ENST00000509009 HES2Q9Y543 173 aa13.88□□□□□ -0.19
PDPN-208ENST00000509009 A0A1B0GUA9 196 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 TMEM221A6NGB7 291 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 M0R296 226 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 B4GALT5O43286 388 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 USO1O60763 962 aaKnown RBP13.87□□□□□ -0.19
PDPN-208ENST00000509009 RPA1P27694 616 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
PDPN-208ENST00000509009 HMGN5P82970 282 aaKnown RBP13.87□□□□□ -0.19
PDPN-208ENST00000509009 ORC2Q13416 577 aaPredicted RBP13.87□□□□□ -0.19
PDPN-208ENST00000509009 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 TAS1R1Q7RTX1 841 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 KLHL5Q96PQ7 755 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 SH2B1Q9NRF2 756 aaPredicted RBP13.87□□□□□ -0.19
PDPN-208ENST00000509009 STK39Q9UEW8 545 aa13.87□□□□□ -0.19
PDPN-208ENST00000509009 EFEMP2O95967 443 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 SSBP05455 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
PDPN-208ENST00000509009 CNPP09543 421 aaKnown RBP13.86□□□□□ -0.19
PDPN-208ENST00000509009 WEE2P0C1S8 567 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 CYP11B2P19099 503 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 MTHFRP42898 656 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 DSC1Q08554 894 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 TTC38Q5R3I4 469 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 ATAT1Q5SQI0 421 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 RARS2Q5T160 578 aaKnown RBP13.86□□□□□ -0.19
PDPN-208ENST00000509009 PPFIBP1Q86W92 1011 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 CDR2LQ86X02 465 aaPredicted RBP13.86□□□□□ -0.19
PDPN-208ENST00000509009 NOSTRINQ8IVI9 506 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 GSTCDQ8NEC7 633 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 MCPH1Q8NEM0 835 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 ZFP42Q96MM3 310 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 APOL6Q9BWW8 343 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 FZD8Q9H461 694 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 DZANK1Q9NVP4 752 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 MARCH5Q9NX47 278 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 GIT1Q9Y2X7 761 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 ZDBF2Q9HCK1 2354 aa13.86□□□□□ -0.19
PDPN-208ENST00000509009 LRRIQ4A6NIV6 560 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 NPTXRO95502 500 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 SOD2P04179 222 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 SP100P23497 879 aaPredicted RBP13.85□□□□□ -0.19
PDPN-208ENST00000509009 AKAP5P24588 427 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 KLRC2P26717 231 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
PDPN-208ENST00000509009 MLH1P40692 756 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 OR1G1P47890 313 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 TRAPPC10P48553 1259 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 SCNN1GP51170 649 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 PTPN21Q16825 1174 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 KIAA0319Q5VV43 1072 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 SLC27A1Q6PCB7 646 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 PADI6Q6TGC4 694 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 FAM184AQ8NB25 1140 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 ERMNQ8TAM6 284 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 PBXIP1Q96AQ6 731 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 RIPOR3Q96MK2 946 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 EMILIN2Q9BXX0 1053 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 TRIM6Q9C030 488 aaPredicted RBP13.85□□□□□ -0.19
PDPN-208ENST00000509009 NXF3Q9H4D5 531 aaKnown RBP13.85□□□□□ -0.19
PDPN-208ENST00000509009 MRPL17Q9NRX2 175 aaKnown RBP13.85□□□□□ -0.19
PDPN-208ENST00000509009 PRG3Q9Y2Y8 225 aaPredicted RBP13.85□□□□□ -0.19
PDPN-208ENST00000509009 NR2E1Q9Y466 385 aa13.85□□□□□ -0.19
PDPN-208ENST00000509009 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 C2CD4DB7Z1M9 353 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 F8W810 466 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 MUTP22033 750 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 U2AF2P26368 475 aaKnown RBP eCLIP13.84□□□□□ -0.19
PDPN-208ENST00000509009 TOB1P50616 345 aaPredicted RBP13.84□□□□□ -0.19
PDPN-208ENST00000509009 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
PDPN-208ENST00000509009 CLCN4P51793 760 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 SIGLEC14Q08ET2 396 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 PDIA5Q14554 519 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 NBR1Q14596 966 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 ECM1Q16610 540 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 FAM187BQ17R55 369 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 CDCA2Q69YH5 1023 aaPredicted RBP13.84□□□□□ -0.19
PDPN-208ENST00000509009 TMC5Q6UXY8 1006 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 CABP7Q86V35 215 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 HACE1Q8IYU2 909 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms