RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 PPP1R21Q6ZMI0 780 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 PALM2Q8IXS6 379 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CEP112Q8N8E3 955 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ERLEC1Q96DZ1 483 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 KIF12Q96FN5 646 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF512BQ96KM6 892 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TCEANC2Q96MN5 208 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 WDR18Q9BV38 432 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 IDI2Q9BXS1 227 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 RSPH9Q9H1X1 276 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DISC1Q9NRI5 854 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 C1orf112Q9NSG2 853 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LSM7Q9UK45 103 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 NRXN2Q9P2S2 1712 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SYNJ2BP-COX16A0A087WUM0 186 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 BNIP3LO60238 219 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LAG3P18627 525 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MAPK1P28482 360 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 YWHABP31946 246 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 RAB27AP51159 221 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ACLYP53396 1101 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TPD52P55327 224 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ST8SIA6P61647 398 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MXD4Q14582 209 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LRRC41Q15345 812 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CELF3Q5SZQ8 465 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 HEATR6Q6AI08 1181 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 NDUFAF2Q8N183 169 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ITFG2Q969R8 447 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 NT5C3AQ9H0P0 336 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TRPV6Q9H1D0 765 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SUDS3Q9H7L9 328 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SCUBE2Q9NQ36 999 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 COX16Q9P0S2 106 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LIMCH1Q9UPQ0 1083 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 INSL6Q9Y581 213 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TTLL13PA6NNM8 815 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TMEM110-MUSTN1A8MSY1 372 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 POMCP01189 267 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 RPS2P15880 293 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 NASPP49321 788 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 BCAR1P56945 870 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 BYSLQ13895 437 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 C4orf46Q504U0 113 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CFAP157Q5JU67 520 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ATAT1Q5SQI0 421 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 C11orf96Q7Z7L8 435 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 APPL2Q8NEU8 664 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TBCKQ8TEA7 893 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TRIM63Q969Q1 353 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SKA1Q96BD8 255 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DHX58Q96C10 678 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DYDC2Q96IM9 177 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 C1QTNF1Q9BXJ1 281 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 FAM8A1Q9UBU6 413 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LRWD1Q9UFC0 647 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 COLQQ9Y215 455 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 PAXBP1Q9Y5B6 917 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DYNC1I1O14576 645 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CREB3O43889 395 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 HUS1O60921 280 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TAL1P17542 331 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CYP2J2P51589 502 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 IRX5P78411 483 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CKAP4Q07065 602 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DPYDQ12882 1025 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TRIM32Q13049 653 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 KIZQ2M2Z5 673 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ANO6Q4KMQ2 910 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 PCNX4Q63HM2 1172 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DYMQ7RTS9 669 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LRRC71Q8N4P6 559 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 FANCBQ8NB91 859 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 NPLOC4Q8TAT6 608 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 GDPD5Q8WTR4 605 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LMBR1Q8WVP7 490 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CASP10Q92851 521 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 OSBP2Q969R2 916 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ACCSQ96QU6 501 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 STRBPQ96SI9 672 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 PORCNQ9H237 461 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 KLK14Q9P0G3 267 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CD207Q9UJ71 328 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MYMKA6NI61 221 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF233A6NK53 670 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 DLATP10515 647 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 GJA8P48165 433 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ARL4DP49703 201 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PPP4CP60510 307 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 MXRA7P84157 204 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 TFAMQ00059 246 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PRKCQQ04759 706 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 LRRC32Q14392 662 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SBK1Q52WX2 424 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 HERC4Q5GLZ8 1057 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 TDRD10Q5VZ19 366 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 KRT40Q6A162 431 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 MAMSTRQ6ZN01 415 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 USP51Q70EK9 711 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms