RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 RHOUQ7L0Q8 258 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 THNSL2Q86YJ6 484 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 CPPED1Q9BRF8 314 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 TARS2Q9BW92 718 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 PITHD1Q9GZP4 211 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 POFUT1Q9H488 388 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 CYP4F11Q9HBI6 524 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 TOMM22Q9NS69 142 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 TESQ9UGI8 421 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 HDAC5Q9UQL6 1122 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 A0A087X0B3 334 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 A0A0A6YYJ9 748 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 ST20-MTHFSA0A0A6YYL1 179 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 GRXCR1A8MXD5 290 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 PRPF6O94906 941 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 LAG3P18627 525 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 POU3F2P20265 443 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 NR4A1P22736 598 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 SEPT7Q16181 437 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 CREB3L3Q68CJ9 461 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 ESRP1Q6NXG1 681 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 RNF180Q86T96 592 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 DHX37Q8IY37 1157 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 ZZZ3Q8IYH5 903 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 GLB1L3Q8NCI6 653 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 OR5M3Q8NGP4 307 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 ELF4Q99607 663 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 MYL10Q9BUA6 226 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 OSBPL6Q9BZF3 934 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 B4GALT6Q9UBX8 382 aa3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 COL3A1P02461 1466 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-205ENST00000506779 MYO15BQ96JP2 1530 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 SETD1BQ9UPS6 1966 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 GRID2IPA4D2P6 1211 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 ALDH1A2O94788 518 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 PCDH8O95206 1070 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 VIL1P09327 827 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 KRT10P13645 584 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 GYS2P54840 703 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 FAM83AQ86UY5 434 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 LRRTM3Q86VH5 581 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 CXorf67Q86X51 503 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 UNC5BQ8IZJ1 945 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 BEND2Q8NDZ0 799 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 RTF1Q92541 710 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 FERMT2Q96AC1 680 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 ORAI3Q9BRQ5 295 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 PRDM13Q9H4Q3 707 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 ING3Q9NXR8 418 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 FRMD4BQ9Y2L6 1034 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 ZKSCAN5Q9Y2L8 839 aa3.77□□□□□ -1.81
TOPBP1-205ENST00000506779 SPATA31A6Q5VVP1 1343 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 SALL3Q9BXA9 1300 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 CBX4O00257 560 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 HOXA3O43365 443 aaPredicted RBP3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 DNAJC6O75061 913 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 JMJD7P0C870 316 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 GAAP10253 952 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 XPAP23025 273 aaPredicted RBP3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 CD40P25942 277 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 USP14P54578 494 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 CFAP100Q494V2 611 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 UNQ6494/PRO21346Q6UXR6 183 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 KANSL1Q7Z3B3 1105 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 SUPT20HQ8NEM7 779 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 IL17RAQ96F46 866 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 SLC46A2Q9BY10 475 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 KCNH6Q9H252 994 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 ZNF768Q9H5H4 540 aaKnown RBP3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 TRPM5Q9NZQ8 1165 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 PCDHB6Q9Y5E3 794 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 SPO11Q9Y5K1 396 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 HS3ST4Q9Y661 456 aa3.76□□□□□ -1.81
TOPBP1-205ENST00000506779 CNTNAP2Q9UHC6 1331 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 PDE8AO60658 829 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 KPNA6O60684 536 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 GAS7O60861 476 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 APOBEC3AP31941 199 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 CASRP41180 1078 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 WNT3AP56704 352 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 DSG1Q02413 1049 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 DUSP2Q05923 314 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 VPS72Q15906 364 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 KLHL22Q53GT1 634 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 CDCA2Q69YH5 1023 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 IQSEC1Q6DN90 963 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 CRELD2Q6UXH1 353 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 PASD1Q8IV76 773 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 FAM177A1Q8N128 213 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 PPM1KQ8N3J5 372 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 LCORLQ8N3X6 602 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 CDYL2Q8N8U2 506 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 PIK3C3Q8NEB9 887 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 OR52N2Q8NGI0 321 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 PDCD2LQ9BRP1 358 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 NDC1Q9BTX1 674 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 CPEB1Q9BZB8 566 aaKnown RBP3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 MTFR1LQ9H019 292 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 TOR3AQ9H497 397 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 OXSMQ9NWU1 459 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms