RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 PCDHA13Q9Y5I0 950 aa7.62□□□□□ -1.19
HERC4-213ENST00000506515 C9orf118A6NHY6 69 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 ERC2O15083 957 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 CTNND1O60716 968 aaKnown RBP7.61□□□□□ -1.19
HERC4-213ENST00000506515 WASP42768 502 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 ATP2C1P98194 919 aaPredicted RBP7.61□□□□□ -1.19
HERC4-213ENST00000506515 SEPT2Q15019 361 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 ZNF827Q17R98 1081 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 PGS1Q32NB8 556 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 ZMAT1Q5H9K5 638 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 TCERG1LQ5VWI1 586 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 CIAPIN1Q6FI81 312 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 USP30Q70CQ3 517 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 RALYLQ86SE5 291 aaKnown RBP7.61□□□□□ -1.19
HERC4-213ENST00000506515 RHOT1Q8IXI2 618 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 CCDC146Q8IYE0 955 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 PRR18Q8N4B5 295 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 OR14K1Q8NGZ2 314 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 KAT5Q92993 513 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 MVB12AQ96EY5 273 aa7.61□□□□□ -1.19
HERC4-213ENST00000506515 C14orf93Q9H972 538 aaKnown RBP7.61□□□□□ -1.19
HERC4-213ENST00000506515 DDX20Q9UHI6 824 aaKnown RBP7.61□□□□□ -1.19
HERC4-213ENST00000506515 THOC2Q8NI27 1593 aaKnown RBP7.6□□□□□ -1.19
HERC4-213ENST00000506515 MROH6A6NGR9 719 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 FAM171A2A8MVW0 826 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 PHF2O75151 1096 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 TOX4O94842 621 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 ECHS1P30084 290 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 KIR2DL3P43628 341 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 SLURP1P55000 103 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 PER3P56645 1201 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 TBR1Q16650 682 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 KRT40Q6A162 431 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 Q6ZVL8 140 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 DGKHQ86XP1 1220 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 KBTBD2Q8IY47 623 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 ZDHHC14Q8IZN3 488 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 CAMKK1Q8N5S9 505 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 MARCH10Q8NA82 808 aaPredicted RBP7.6□□□□□ -1.19
HERC4-213ENST00000506515 DIS3LQ8TF46 1054 aaKnown RBP7.6□□□□□ -1.19
HERC4-213ENST00000506515 RUNDC1Q96C34 613 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 TIFAQ96CG3 184 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 SLC7A6OSQ96CW6 309 aaPredicted RBP7.6□□□□□ -1.19
HERC4-213ENST00000506515 MBD6Q96DN6 1003 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 ACO2Q99798 780 aaKnown RBP7.6□□□□□ -1.19
HERC4-213ENST00000506515 PRDM11Q9NQV5 511 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 SMARCA4P51532 1647 aa7.6□□□□□ -1.19
HERC4-213ENST00000506515 CAND2O75155 1236 aa7.59□□□□□ -1.19
HERC4-213ENST00000506515 BPIFB4P59827 614 aa7.59□□□□□ -1.19
HERC4-213ENST00000506515 GRM3Q14832 879 aa7.59□□□□□ -1.19
HERC4-213ENST00000506515 ZNF568Q3ZCX4 644 aa7.59□□□□□ -1.19
HERC4-213ENST00000506515 C19orf54Q5BKX5 351 aa7.59□□□□□ -1.19
HERC4-213ENST00000506515 ZBTB34Q8NCN2 500 aa7.59□□□□□ -1.19
HERC4-213ENST00000506515 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.59□□□□□ -1.19
HERC4-213ENST00000506515 LPPQ93052 612 aa7.59□□□□□ -1.19
HERC4-213ENST00000506515 RAB24Q969Q5 203 aa7.59□□□□□ -1.19
HERC4-213ENST00000506515 UHRF1Q96T88 793 aaPredicted RBP7.59□□□□□ -1.19
HERC4-213ENST00000506515 MRC2Q9UBG0 1479 aa7.59□□□□□ -1.19
HERC4-213ENST00000506515 FRMPD2Q68DX3 1309 aaPredicted RBP7.58□□□□□ -1.2
HERC4-213ENST00000506515 CCDC194A0A1B0GVG4 234 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 B4GALT4O60513 344 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 ENDOD1O94919 500 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 KRT18P05783 430 aaKnown RBP7.58□□□□□ -1.2
HERC4-213ENST00000506515 MST1LQ2TV78 715 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 FAM124AQ86V42 546 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 ANKRD53Q8N9V6 530 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 PPP1R35Q8TAP8 253 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 ZNF480Q8WV37 535 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 HOXB13Q92826 284 aaPredicted RBP7.58□□□□□ -1.2
HERC4-213ENST00000506515 RPL10LQ96L21 214 aaKnown RBP7.58□□□□□ -1.2
HERC4-213ENST00000506515 C1orf112Q9NSG2 853 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 NR2E1Q9Y466 385 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 PEG3Q9GZU2 1588 aa7.58□□□□□ -1.2
HERC4-213ENST00000506515 KCNC1P48547 511 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 KIAA2012Q0VF49 1180 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 RNF151Q2KHN1 245 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 PPP4R3AQ6IN85 833 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 KSR2Q6VAB6 950 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 CCAR1Q8IX12 1150 aaKnown RBP7.57□□□□□ -1.2
HERC4-213ENST00000506515 PQLC1Q8N2U9 271 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 CCHCR1Q8TD31 782 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 C1GALT1C1Q96EU7 318 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 FMNL2Q96PY5 1086 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 SLC6A15Q9H2J7 730 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 NCDNQ9UBB6 729 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 PCDHB1Q9Y5F3 818 aa7.57□□□□□ -1.2
HERC4-213ENST00000506515 ARHGAP6O43182 974 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 ADCY6O43306 1168 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 ITGA10O75578 1167 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 MAP4K4O95819 1239 aaPredicted RBP7.56□□□□□ -1.2
HERC4-213ENST00000506515 VSIG10L2P0DP72 767 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 SLC6A9P48067 706 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 ADCY7P51828 1080 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 WNT3AP56704 352 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 GJA9P57773 515 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 DUSP2Q05923 314 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 GBX1Q14549 363 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 GJC2Q5T442 439 aaPredicted RBP7.56□□□□□ -1.2
HERC4-213ENST00000506515 KRTAP1-3Q8IUG1 177 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 DRC7Q8IY82 874 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms