RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 SEPT3Q9UH03 358 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 RCAN3Q9UKA8 241 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 KCNH3Q9ULD8 1083 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 STX8Q9UNK0 236 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 GINS2Q9Y248 185 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 PCDHB9Q9Y5E1 797 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 PCDHB15Q9Y5E8 787 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 HEMK1Q9Y5R4 338 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 FRMPD4Q14CM0 1322 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 DOPEY1Q5JWR5 2465 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 SMIM35A0A1B0GVV1 85 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 MINDY4BA8MYZ0 360 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 TERTO14746 1132 aaKnown RBP4.87□□□□□ -1.63
CPNE4-204ENST00000505331 TGM5O43548 720 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 EXTL3O43909 919 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 OPHN1O60890 802 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 ATG13O75143 517 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 XYLBO75191 536 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 SOD2P04179 222 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 HNRNPA1P09651 372 aaKnown RBP eCLIP4.87□□□□□ -1.63
CPNE4-204ENST00000505331 SPATA31D3P0C874 917 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 ZSCAN20P17040 1043 aaPredicted RBP4.87□□□□□ -1.63
CPNE4-204ENST00000505331 GBP1P32455 592 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 ADD2P35612 726 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 CXADRP78310 365 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 NTHL1P78549 312 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 TFAP4Q01664 338 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 CAMK2BQ13554 666 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 AAMPQ13685 434 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 GNPTABQ3T906 1256 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 USH1GQ495M9 461 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 PKDCCQ504Y2 493 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 CCDC184Q52MB2 194 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 PMS2CLQ68D20 193 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 TANGO2Q6ICL3 276 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 GIMAP6Q6P9H5 292 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 SPATA31D4Q6ZUB0 917 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 MAP4K3Q8IVH8 894 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 GALNT15Q8N3T1 639 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 RNF169Q8NCN4 708 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 ITFG1Q8TB96 612 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 TMEM40Q8WWA1 233 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 BAP1Q92560 729 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 ZBTB10Q96DT7 871 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 PSMG3-AS1Q96PY0 264 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 MEIS3Q99687 375 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 APOL6Q9BWW8 343 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 TRIM4Q9C037 500 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 C8orf33Q9H7E9 229 aaPredicted RBP4.87□□□□□ -1.63
CPNE4-204ENST00000505331 HSPBP1Q9NZL4 362 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 SLC8A2Q9UPR5 921 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 MTMR7Q9Y216 660 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 PCDHA1Q9Y5I3 950 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 LCTP09848 1927 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 MIA3Q5JRA6 1907 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 LAMA1P25391 3075 aa4.87□□□□□ -1.63
CPNE4-204ENST00000505331 GREB1Q4ZG55 1949 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 A0A0U1RQF3 1178 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 A0A1B0GTL3 188 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 SPATA31C2B4DYI2 1134 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 DCLK1O15075 740 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 ZNF862O60290 1169 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 B4GALT3O60512 393 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 AFPP02771 609 aaKnown RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 GNAI3P08754 354 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 CD59P13987 128 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 INSRRP14616 1297 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 MARK3P27448 753 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 CCND2P30279 289 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 HOXA9P31269 272 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 TCF7P36402 384 aaPredicted RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 DPP6P42658 865 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 SLC11A1P49279 550 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 RNASELQ05823 741 aaKnown RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 SLC14A1Q13336 389 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 OS9Q13438 667 aaPredicted RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 CCINQ13939 588 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 GRM2Q14416 872 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 PGM5Q15124 567 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 LILRA6Q6PI73 481 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 SLC23A3Q6PIS1 610 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 CENPQQ7L2Z9 268 aaPredicted RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 GLRX5Q86SX6 157 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 ZNF598Q86UK7 904 aaKnown RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 FAM228AQ86W67 206 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 PALB2Q86YC2 1186 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 CMTR1Q8N1G2 835 aaKnown RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 PIGKQ92643 395 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 GPKOWQ92917 476 aaPredicted RBP eCLIP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 KCTD12Q96CX2 325 aaKnown RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 HERC2P3Q9BVR0 1158 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 FAM117AQ9C073 453 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 SMARCAD1Q9H4L7 1026 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 NRDE2Q9H7Z3 1164 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 CDHR5Q9HBB8 845 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 ZFP14Q9HCL3 533 aa4.86□□□□□ -1.63
CPNE4-204ENST00000505331 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 DAXXQ9UER7 740 aaPredicted RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 MBD1Q9UIS9 605 aaPredicted RBP4.86□□□□□ -1.63
CPNE4-204ENST00000505331 MRPL11Q9Y3B7 192 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms