RNA–Protein interactions for RNA: ENST00000504823.5

FAM200B-208, Transcript of family with sequence similarity 200 member B, human

TSL 3

Gene FAM200B, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-208	ENST00000504823	TMEM169	Q96HH4	297 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	PPP1R16B	Q96T49	567 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	ZMYND12	Q9H0C1	365 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	NRBP2	Q9NSY0	501 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	DACT1	Q9NYF0	836 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	GABBR1	Q9UBS5	961 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	STK39	Q9UEW8	545 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	CDH22	Q9UJ99	828 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	BRPF3	Q9ULD4	1205 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	AKT3	Q9Y243	479 aa		11.11	□□□□□ -0.63
FAM200B-208	ENST00000504823	WDR64	B1ANS9	1081 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	CXCL14	O95715	111 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	CTSA	P10619	480 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	SP100	P23497	879 aa	Predicted RBP	11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	NR6A1	Q15406	480 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	TSGA10IP	Q3SY00	556 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	RNF20	Q5VTR2	975 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	JAKMIP3	Q5VZ66	844 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	DHX32	Q7L7V1	743 aa	Known RBP	11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	ERMP1	Q7Z2K6	904 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	DDX53	Q86TM3	631 aa	Known RBP	11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	PPFIBP1	Q86W92	1011 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	LRRC71	Q8N4P6	559 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	HELQ	Q8TDG4	1101 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	TCEAL9	Q9UHQ7	104 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	NID2	Q14112	1375 aa		11.1	□□□□□ -0.63
FAM200B-208	ENST00000504823	WDR81	Q562E7	1941 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	CACNA1A	O00555	2505 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	ZFHX4	Q86UP3	3567 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	ZNF862	O60290	1169 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	AP1G2	O75843	785 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	SKI	P12755	728 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	AOC1	P19801	751 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	CDC27	P30260	824 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	PHKA2	P46019	1235 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	TARBP2	Q15633	366 aa	Known RBP	11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	RARS2	Q5T160	578 aa	Known RBP	11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	CWF19L1	Q69YN2	538 aa	Known RBP	11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	VPS52	Q8N1B4	723 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	REXO1	Q8N1G1	1221 aa	Known RBP	11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	IGSF21	Q96ID5	467 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	RIT2	Q99578	217 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	SMOC2	Q9H3U7	446 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	C6orf50	Q9HD87	102 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	CYP26B1	Q9NR63	512 aa		11.09	□□□□□ -0.63
FAM200B-208	ENST00000504823	IGKV6-21	A0A0C4DH24	114 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	GOLGA8A	A7E2F4	631 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	GOLGA8B	A8MQT2	603 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	NT5C1B-RDH14	C9J2C7	533 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	ADAMTS3	O15072	1205 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	ZNF623	O75123	536 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	ASGR2	P07307	311 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	EPCAM	P16422	314 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	NPR3	P17342	541 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	GNA11	P29992	359 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	SFN	P31947	248 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	METAP2	P50579	478 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	PRKCE	Q02156	737 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	PRR16	Q569H4	304 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	GPR149	Q86SP6	731 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	TMEM173	Q86WV6	379 aa	Predicted RBP	11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	CCDC105	Q8IYK2	499 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	MEIOB	Q8N635	442 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	C12orf76	Q8N812	135 aa	Predicted RBP	11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	RNF169	Q8NCN4	708 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	RDM1	Q8NG50	284 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	NKD2	Q969F2	451 aa	Predicted RBP	11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	ACSF2	Q96CM8	615 aa	Predicted RBP	11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	CEP89	Q96ST8	783 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	ARHGAP9	Q9BRR9	750 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	NIFK	Q9BYG3	293 aa	Known RBP	11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	RHOBTB2	Q9BYZ6	727 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	SFXN1	Q9H9B4	322 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	DISC1	Q9NRI5	854 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	DBR1	Q9UK59	544 aa	Known RBP	11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	DUSP12	Q9UNI6	340 aa		11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	RIF1	Q5UIP0	2472 aa	Known RBP	11.08	□□□□□ -0.64
FAM200B-208	ENST00000504823	MYO10	Q9HD67	2058 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	KLF18	A0A0U1RQI7	1052 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	CCDC196	A0A1B0GTZ2	297 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	SOBP	A7XYQ1	873 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	MSH4	O15457	936 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	EDIL3	O43854	480 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	PAPLN	O95428	1278 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	GALT	P07902	379 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	WEE2	P0C1S8	567 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	SFPQ	P23246	707 aa	Known RBP eCLIP	11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	RAB27A	P51159	221 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	CLCN4	P51793	760 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	JAK3	P52333	1124 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	TDG	Q13569	410 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	PTPN14	Q15678	1187 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	C6orf118	Q5T5N4	469 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	C15orf39	Q6ZRI6	1047 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	OTOP3	Q7RTS5	596 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	FRMD5	Q7Z6J6	570 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	CABP7	Q86V35	215 aa		11.07	□□□□□ -0.64
FAM200B-208	ENST00000504823	ZNF410	Q86VK4	478 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms