RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 ECHDC2Q86YB7 292 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 NPAS4Q8IUM7 802 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 PGBD4Q96DM1 585 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 BICD1Q96G01 975 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 TCHPQ9BT92 498 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 TARS2Q9BW92 718 aaKnown RBP19.97■□□□□ 0.79
DDR1-252ENST00000504152 EXOC1Q9NV70 894 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 TMEM161AQ9NX61 479 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 TNFSF13BQ9Y275 285 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 USP20Q9Y2K6 914 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 PCDHB2Q9Y5E7 798 aa19.97■□□□□ 0.79
DDR1-252ENST00000504152 TTLL13PA6NNM8 815 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 KLRC4O43908 158 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 GJB5O95377 273 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 PRR29P0C7W0 189 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 FAM26FQ5R3K3 315 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 UBXN11Q5T124 520 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 FAM117BQ6P1L5 589 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 ZPBP2Q6X784 338 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 CDR2LQ86X02 465 aaPredicted RBP19.96■□□□□ 0.79
DDR1-252ENST00000504152 HACE1Q8IYU2 909 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 ACCSQ96QU6 501 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 RAD9AQ99638 391 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 STRA6Q9BX79 667 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 EXOC7Q9UPT5 735 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 INSL6Q9Y581 213 aa19.96■□□□□ 0.79
DDR1-252ENST00000504152 GRXCR1A8MXD5 290 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 TLL1O43897 1013 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 LIG4P49917 911 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 SMAD3P84022 425 aaKnown RBP19.95■□□□□ 0.78
DDR1-252ENST00000504152 EHHADHQ08426 723 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 PNOCQ13519 176 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 TMCO2Q7Z6W1 182 aaPredicted RBP19.95■□□□□ 0.78
DDR1-252ENST00000504152 MRPL10Q7Z7H8 261 aaKnown RBP19.95■□□□□ 0.78
DDR1-252ENST00000504152 CRIPAKQ8N1N5 446 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 RNF169Q8NCN4 708 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 HPS3Q969F9 1004 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 PDZD7Q9H5P4 517 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 TMEM206Q9H813 350 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 SLC39A2Q9NP94 309 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 MSRAQ9UJ68 235 aa19.95■□□□□ 0.78
DDR1-252ENST00000504152 HOXA2O43364 376 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 TOM1L1O75674 476 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 PPP1R37O75864 691 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 NPTXRO95502 500 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 EDN1P05305 212 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 MYBP10242 640 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 MATR3P43243 847 aaKnown RBP eCLIP19.94■□□□□ 0.78
DDR1-252ENST00000504152 KCNB1Q14721 858 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 DCAF4L1Q3SXM0 396 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 L1TD1Q5T7N2 865 aaKnown RBP19.94■□□□□ 0.78
DDR1-252ENST00000504152 FAM109BQ6ICB4 259 aaPredicted RBP19.94■□□□□ 0.78
DDR1-252ENST00000504152 MAP4K3Q8IVH8 894 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 SYCP3Q8IZU3 236 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 GSDMAQ96QA5 445 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 EIF2AQ9BY44 585 aaKnown RBP19.94■□□□□ 0.78
DDR1-252ENST00000504152 UBN1Q9NPG3 1134 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 RMND1Q9NWS8 449 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 PCDHA11Q9Y5I1 949 aa19.94■□□□□ 0.78
DDR1-252ENST00000504152 HNRNPDLO14979 420 aaKnown RBP19.93■□□□□ 0.78
DDR1-252ENST00000504152 EIF3DO15371 548 aaKnown RBP eCLIP19.93■□□□□ 0.78
DDR1-252ENST00000504152 CLDN3O15551 220 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 DGKIO75912 1065 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 PRPF6O94906 941 aaKnown RBP19.93■□□□□ 0.78
DDR1-252ENST00000504152 RHOBTB3O94955 611 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 PIGRP01833 764 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 ITGA4P13612 1032 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 CASP5P51878 434 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 RABGGTBP53611 331 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 RAB30Q15771 203 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 EEF1DP3Q658K8 133 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 SLFN12LQ6IEE8 588 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 MPZL3Q6UWV2 235 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 ZNF598Q86UK7 904 aaKnown RBP19.93■□□□□ 0.78
DDR1-252ENST00000504152 ZNF507Q8TCN5 953 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 SMARCE1Q969G3 411 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 YME1L1Q96TA2 773 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 PTPRHQ9HD43 1115 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 IPPQ9Y573 584 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 PCDHA5Q9Y5H7 936 aa19.93■□□□□ 0.78
DDR1-252ENST00000504152 MCM4P33991 863 aa19.92■□□□□ 0.78
DDR1-252ENST00000504152 HTRA4P83105 476 aaPredicted RBP19.92■□□□□ 0.78
DDR1-252ENST00000504152 STK4Q13043 487 aa19.92■□□□□ 0.78
DDR1-252ENST00000504152 EPM2AIP1Q7L775 607 aaPredicted RBP19.92■□□□□ 0.78
DDR1-252ENST00000504152 ZBTB33Q86T24 672 aa19.92■□□□□ 0.78
DDR1-252ENST00000504152 ABI1Q8IZP0 508 aa19.92■□□□□ 0.78
DDR1-252ENST00000504152 SMG8Q8ND04 991 aaKnown RBP19.92■□□□□ 0.78
DDR1-252ENST00000504152 ZBTB45Q96K62 511 aaPredicted RBP19.92■□□□□ 0.78
DDR1-252ENST00000504152 FGFBP2Q9BYJ0 223 aa19.92■□□□□ 0.78
DDR1-252ENST00000504152 GTPBP4Q9BZE4 634 aaKnown RBP19.92■□□□□ 0.78
DDR1-252ENST00000504152 LAMA2P24043 3122 aaKnown RBP19.92■□□□□ 0.78
DDR1-252ENST00000504152 KIF20AO95235 890 aa19.91■□□□□ 0.78
DDR1-252ENST00000504152 MCF2P10911 925 aa19.91■□□□□ 0.78
DDR1-252ENST00000504152 PROZP22891 400 aa19.91■□□□□ 0.78
DDR1-252ENST00000504152 KCNA1Q09470 495 aa19.91■□□□□ 0.78
DDR1-252ENST00000504152 ZNF568Q3ZCX4 644 aa19.91■□□□□ 0.78
DDR1-252ENST00000504152 RSPH1Q8WYR4 309 aa19.91■□□□□ 0.78
DDR1-252ENST00000504152 ZNF689Q96CS4 500 aaPredicted RBP19.91■□□□□ 0.78
DDR1-252ENST00000504152 PBX4Q9BYU1 374 aa19.91■□□□□ 0.78
DDR1-252ENST00000504152 PTPRSQ13332 1948 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms