RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 SDCCAG3Q96C92 435 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 FAXDC2Q96IV6 333 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 DDX50Q9BQ39 737 aaKnown RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 SIKE1Q9BRV8 207 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 BHMT2Q9H2M3 363 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 UBE2TQ9NPD8 197 aaPredicted RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 NOP53Q9NZM5 478 aaKnown RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 APEX2Q9UBZ4 518 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 ADAM21Q9UKJ8 722 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 ZBTB21Q9ULJ3 1066 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 PCDHB2Q9Y5E7 798 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 TACC3Q9Y6A5 838 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 IGSF9BQ9UPX0 1349 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 TTC26A0AVF1 554 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 LRRD1A4D1F6 860 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 SOWAHDA6NJG2 315 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 F5H6K3 240 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 PRKAB2O43741 272 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 LSM8O95777 96 aaKnown RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 KRT1P04264 644 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 S100BP04271 92 aaPredicted RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 PLS3P13797 630 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 GJC1P36383 396 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 CLNS1AP54105 237 aaKnown RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 KLRC3Q07444 240 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 TTLL4Q14679 1199 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 MESDQ14696 234 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 ZNF827Q17R98 1081 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 DUOXA2Q1HG44 320 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 QRICH1Q2TAL8 776 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 CENPPQ6IPU0 288 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 PDXDC2PQ6P474 469 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 COL23A1Q86Y22 540 aaPredicted RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 KIAA0825Q8IV33 1275 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 GSDMBQ8TAX9 411 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 SH3RF3Q8TEJ3 882 aaPredicted RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 CMTM5Q96DZ9 223 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 CEP95Q96GE4 821 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 TNIP3Q96KP6 325 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 KATNAL1Q9BW62 490 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 INTS2Q9H0H0 1204 aaKnown RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 ISCUQ9H1K1 167 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 RIOX1Q9H6W3 641 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 TMEM8AQ9HCN3 771 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 KCNQ5Q9NR82 932 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 ADAM22Q9P0K1 906 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 GTF3C4Q9UKN8 822 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 CAPN7Q9Y6W3 813 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 MYPNQ86TC9 1320 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 H7C0C1 242 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 PSTPIP1O43586 416 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 CTNND1O60716 968 aaKnown RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 IL1R1P14778 569 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 GUCY2CP25092 1073 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 HSPA1LP34931 641 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 HADHAP40939 763 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 ATP5OP48047 213 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 MRPS9P82933 396 aaKnown RBP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 P3H1Q32P28 736 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 PRUNE1Q86TP1 453 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 PALB2Q86YC2 1186 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 AGGF1Q8N302 714 aaeCLIP5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 STAG2Q8N3U4 1231 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 FAM133AQ8N9E0 248 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 SPATA4Q8NEY3 305 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 ACAP3Q96P50 834 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 GBP5Q96PP8 586 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 AGPAT1Q99943 283 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 VCPKMTQ9H867 229 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 ABCB6Q9NP58 842 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 NRBP1Q9UHY1 535 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 TLK1Q9UKI8 766 aa5.06□□□□□ -1.6
NDFIP1-202ENST00000503388 EXOC1LA0A1B0GW35 172 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 RRN3P2A6NIE6 340 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 LRRC53A6NM62 1247 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 CLDN3O15551 220 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 PJA2O43164 708 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 CHEK2O96017 543 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 CD4P01730 458 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 HOXB8P17481 243 aaPredicted RBP5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 HOXB6P17509 224 aaKnown RBP5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 ABCB4P21439 1286 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 SARSP49591 514 aaKnown RBP5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 PMS2P54278 862 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 TPD52P55327 224 aaPredicted RBP5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 SNX1Q13596 522 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 SEC23AQ15436 765 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 NFIL3Q16649 462 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 SGSM1Q2NKQ1 1148 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 IER5Q5VY09 327 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 CCNI2Q6ZMN8 369 aaPredicted RBP5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 SFR1Q86XK3 245 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 TC2NQ8N9U0 490 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 ACTRT1Q8TDG2 376 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 PYROXD1Q8WU10 500 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 PRPF31Q8WWY3 499 aaKnown RBP5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 CAVIN3Q969G5 261 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 KLHL29Q96CT2 875 aa5.05□□□□□ -1.6
NDFIP1-202ENST00000503388 GJD4Q96KN9 370 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms