RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 GREM2Q9H772 168 aa7.73□□□□□ -1.17
NIPBL-203ENST00000503274 PLA2G3Q9NZ20 509 aa7.73□□□□□ -1.17
NIPBL-203ENST00000503274 MRFAP1Q9Y605 127 aa7.73□□□□□ -1.17
NIPBL-203ENST00000503274 SLC30A1Q9Y6M5 507 aa7.73□□□□□ -1.17
NIPBL-203ENST00000503274 MRC2Q9UBG0 1479 aa7.73□□□□□ -1.17
NIPBL-203ENST00000503274 RPTORQ8N122 1335 aa7.73□□□□□ -1.17
NIPBL-203ENST00000503274 KLHL33A6NCF5 533 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 FZD9O00144 591 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 NRP1O14786 923 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 PCDHGA12O60330 932 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 NPEPPSP55786 919 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 MALLQ13021 153 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 ICAM4Q14773 271 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 ACAP2Q15057 778 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 FAM180AQ6UWF9 173 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 Q8TCH9 128 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 RIN2Q8WYP3 895 aaPredicted RBP7.72□□□□□ -1.17
NIPBL-203ENST00000503274 CEP89Q96ST8 783 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 TCF25Q9BQ70 676 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 SLC13A1Q9BZW2 595 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 TLR9Q9NR96 1032 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 SCOCQ9UIL1 159 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 PCDHGA9Q9Y5G4 932 aaKnown RBP7.72□□□□□ -1.17
NIPBL-203ENST00000503274 PCDHGA8Q9Y5G5 932 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 PCDHGA7Q9Y5G6 932 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 PCDHGA6Q9Y5G7 932 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 PCDHGA3Q9Y5H0 932 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 PCDHGA2Q9Y5H1 932 aa7.72□□□□□ -1.17
NIPBL-203ENST00000503274 CEP164Q9UPV0 1460 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 XPOTO43592 962 aaKnown RBP7.71□□□□□ -1.18
NIPBL-203ENST00000503274 ZNF623O75123 536 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 CCND1P24385 295 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 BUD31P41223 144 aaPredicted RBP7.71□□□□□ -1.18
NIPBL-203ENST00000503274 DUSP2Q05923 314 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 LCE5AQ5TCM9 118 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 POLNQ7Z5Q5 900 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 PNMA8AQ86V59 439 aaPredicted RBP7.71□□□□□ -1.18
NIPBL-203ENST00000503274 ANKRD13AQ8IZ07 590 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 TTC9BQ8N6N2 239 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 GPR156Q8NFN8 814 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 JADE3Q92613 823 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 TMEM176AQ96HP8 235 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 ADI1Q9BV57 179 aa7.71□□□□□ -1.18
NIPBL-203ENST00000503274 AKR1B10O60218 316 aa7.7□□□□□ -1.18
NIPBL-203ENST00000503274 PHF2O75151 1096 aa7.7□□□□□ -1.18
NIPBL-203ENST00000503274 FOXL1Q12952 345 aa7.7□□□□□ -1.18
NIPBL-203ENST00000503274 FAM111BQ6SJ93 734 aa7.7□□□□□ -1.18
NIPBL-203ENST00000503274 CHST13Q8NET6 341 aa7.7□□□□□ -1.18
NIPBL-203ENST00000503274 OR5M3Q8NGP4 307 aa7.7□□□□□ -1.18
NIPBL-203ENST00000503274 CD248Q9HCU0 757 aa7.7□□□□□ -1.18
NIPBL-203ENST00000503274 RBM12Q9NTZ6 932 aaKnown RBP7.7□□□□□ -1.18
NIPBL-203ENST00000503274 ST6GALNAC2Q9UJ37 374 aa7.7□□□□□ -1.18
NIPBL-203ENST00000503274 CFTRP13569 1480 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 FANCD2Q9BXW9 1451 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 TOP2AP11388 1531 aaKnown RBP7.69□□□□□ -1.18
NIPBL-203ENST00000503274 GSPT1P15170 499 aaKnown RBP7.69□□□□□ -1.18
NIPBL-203ENST00000503274 GYPEP15421 78 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 MSX2P35548 267 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-203ENST00000503274 CASRP41180 1078 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 MCAMP43121 646 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 GJC2Q5T442 439 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-203ENST00000503274 PPM1NQ8N819 430 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.69□□□□□ -1.18
NIPBL-203ENST00000503274 ARL8AQ96BM9 186 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 MPHOSPH9Q99550 1183 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 ENKD1Q9H0I2 346 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 DEF6Q9H4E7 631 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 DMRT3Q9NQL9 472 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 SMPD4Q9NXE4 827 aa7.69□□□□□ -1.18
NIPBL-203ENST00000503274 COMTP21964 271 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 ADSLP30566 484 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-203ENST00000503274 PPP3CAQ08209 521 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 MST1LQ2TV78 715 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 HS1BP3Q53T59 392 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 EFCAB2Q5VUJ9 269 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 ZBTB46Q86UZ6 589 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 D2HGDHQ8N465 521 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 ZNF480Q8WV37 535 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 CHMP4CQ96CF2 233 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 TEKT5Q96M29 485 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 WWC2-AS2Q96NR7 200 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 GPRC5DQ9NZD1 345 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 DNM3Q9UQ16 869 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 WDR62O43379 1518 aa7.68□□□□□ -1.18
NIPBL-203ENST00000503274 NDUFS2O75306 463 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 ALDH1L1O75891 902 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 GASTP01350 101 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 C5AR1P21730 350 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 NEK2P51955 445 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 EFEMP1Q12805 493 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 ODF1Q14990 250 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 NOMO1Q15155 1222 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 FKBP15Q5T1M5 1219 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 LILRA3Q8N6C8 439 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-203ENST00000503274 C8orf49Q96NF6 230 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 SH3BP1Q9Y3L3 701 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 TCAF1Q9Y4C2 921 aa7.67□□□□□ -1.18
NIPBL-203ENST00000503274 ITGA10O75578 1167 aa7.66□□□□□ -1.18
NIPBL-203ENST00000503274 SNUPNO95149 360 aaKnown RBP7.66□□□□□ -1.18
NIPBL-203ENST00000503274 ECHS1P30084 290 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms