RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 WNT3AP56704 352 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 PPP2CBP62714 309 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 PPP2CAP67775 309 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 SEPT2Q15019 361 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 MLC1Q15049 377 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 GAGE13Q4V321 117 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 GJC2Q5T442 439 aaPredicted RBP6.26□□□□□ -1.41
VPS36-206ENST00000497149 Q6ZVL8 140 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 C14orf80Q86SX3 495 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 ANKRD53Q8N9V6 530 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 CFHR4Q92496 578 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 HOXB13Q92826 284 aaPredicted RBP6.26□□□□□ -1.41
VPS36-206ENST00000497149 RPL10LQ96L21 214 aaKnown RBP6.26□□□□□ -1.41
VPS36-206ENST00000497149 TLR9Q9NR96 1032 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 FAM171A2A8MVW0 826 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 MATN2O00339 956 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 SASH1O94885 1247 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 RAC3P60763 192 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 ADAM8P78325 824 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 MST1LQ2TV78 715 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 LCNL1Q6ZST4 164 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 USP45Q70EL2 814 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 EPM2AIP1Q7L775 607 aaPredicted RBP6.25□□□□□ -1.41
VPS36-206ENST00000497149 PLEKHH3Q7Z736 793 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 ZDHHC14Q8IZN3 488 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 PRR18Q8N4B5 295 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS36-206ENST00000497149 RABGGTAQ92696 567 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 HDAC10Q969S8 669 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 CLIP3Q96DZ5 547 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 C8orf48Q96LL4 319 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 KCNC2Q96PR1 638 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 GPHA2Q96T91 129 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 PUF60Q9UHX1 559 aaKnown RBP6.25□□□□□ -1.41
VPS36-206ENST00000497149 DUSP10Q9Y6W6 482 aa6.25□□□□□ -1.41
VPS36-206ENST00000497149 PMS2P1A4D2B8 440 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 GOLGA6CA6NDK9 693 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 GOLGA6BA6NDN3 693 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 SLC26A4O43511 780 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 OFD1O75665 1012 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 GASTP01350 101 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 GOLGA6DP0CG33 693 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 ECHS1P30084 290 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 SURF1Q15526 300 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 C3orf36Q3SXR2 165 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 MINDY4Q4G0A6 757 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 HSP90AB2PQ58FF8 381 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 IFIT1BQ5T764 474 aaKnown RBP6.24□□□□□ -1.41
VPS36-206ENST00000497149 KRT40Q6A162 431 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 ARHGEF18Q6ZSZ5 1173 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 CATIPQ7Z7H3 387 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 LILRA3Q8N6C8 439 aaPredicted RBP6.24□□□□□ -1.41
VPS36-206ENST00000497149 TTC8Q8TAM2 541 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 FEZF2Q8TBJ5 459 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 ZNF480Q8WV37 535 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 NEIL1Q96FI4 390 aaPredicted RBP6.24□□□□□ -1.41
VPS36-206ENST00000497149 LRGUKQ96M69 825 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 C7orf25Q9BPX7 421 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 GTPBP4Q9BZE4 634 aaKnown RBP6.24□□□□□ -1.41
VPS36-206ENST00000497149 SLC12A5Q9H2X9 1139 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 SEC61A2Q9H9S3 476 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 ANLNQ9NQW6 1124 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 GOLGA6AQ9NYA3 693 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 RAPGEFL1Q9UHV5 662 aa6.24□□□□□ -1.41
VPS36-206ENST00000497149 AP1G1O43747 822 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 HSPA6P17066 643 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 ATF3P18847 181 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 DUSP2Q05923 314 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 IL10RAQ13651 578 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 SAFB2Q14151 953 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS36-206ENST00000497149 ATAT1Q5SQI0 421 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 CCDC181Q5TID7 509 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 LILRA6Q6PI73 481 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 MIGA2Q7L4E1 593 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 CMTM4Q8IZR5 234 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 SLC35G2Q8TBE7 412 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 HPS3Q969F9 1004 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 C12orf65Q9H3J6 166 aaKnown RBP6.23□□□□□ -1.41
VPS36-206ENST00000497149 BCO1Q9HAY6 547 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 NMRK2Q9NPI5 230 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 GPRC5DQ9NZD1 345 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 TRPS1Q9UHF7 1281 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 SIK3Q9Y2K2 1263 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 PCDHA13Q9Y5I0 950 aa6.23□□□□□ -1.41
VPS36-206ENST00000497149 NRP1O14786 923 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 ITGA10O75578 1167 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 ENDOD1O94919 500 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 GYPEP15421 78 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 CR2P20023 1033 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 CRHR1P34998 444 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 SLC6A9P48067 706 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 FXR1P51114 621 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS36-206ENST00000497149 EPHB4P54760 987 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 PER3P56645 1201 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 ZNF267Q14586 743 aaPredicted RBP6.22□□□□□ -1.41
VPS36-206ENST00000497149 GFOD2Q3B7J2 385 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 B3GNT9Q6UX72 402 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 ADGRE4PQ86SQ3 457 aa6.22□□□□□ -1.41
VPS36-206ENST00000497149 RHOT1Q8IXI2 618 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms