RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 DOCK6Q96HP0 2047 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 MYH15Q9Y2K3 1946 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 STK25O00506 426 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 GAS7O60861 476 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 LILRB3O75022 631 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 RFPL2O75678 378 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 U2AF2P26368 475 aaKnown RBP eCLIP13.1□□□□□ -0.313e-11■■□□□ 12.7
CSNK1E-212ENST00000494610 KRT85P78386 507 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 RESTQ13127 1097 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 PKP1Q13835 747 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 SPECC1Q5M775 1068 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 LRCH2Q5VUJ6 765 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 GLB1LQ6UWU2 654 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 CCDC149Q6ZUS6 474 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 NOSTRINQ8IVI9 506 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 PLCD3Q8N3E9 789 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 AIFM3Q96NN9 605 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 MYADMQ96S97 322 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 MINDY3Q9H8M7 445 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 DACT1Q9NYF0 836 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 CFAP45Q9UL16 551 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 PCDHA4Q9UN74 947 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 DUSP12Q9UNI6 340 aa13.1□□□□□ -0.31
CSNK1E-212ENST00000494610 GPR179Q6PRD1 2367 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 IGKV6-21A0A0C4DH24 114 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 MED19A0JLT2 244 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 NRP1O14786 923 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 PSMD10O75832 226 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 TRAPPC10P48553 1259 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 POLGP54098 1239 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 NPEPPSP55786 919 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 GUCY1B3Q02153 619 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 LETM2Q2VYF4 491 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 RILPL1Q5EBL4 403 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 UBXN11Q5T124 520 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 FAM43BQ6ZT52 329 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 ANO5Q75V66 913 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 CATSPER4Q7RTX7 472 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 MIER3Q7Z3K6 550 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 KRT25Q7Z3Z0 450 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 KCNG4Q8TDN1 519 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 RABGGTAQ92696 567 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 ACSF2Q96CM8 615 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 RMDN1Q96DB5 314 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 TEKT3Q9BXF9 490 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 NIFKQ9BYG3 293 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 RNF39Q9H2S5 420 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 SFXN1Q9H9B4 322 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 MAN1C1Q9NR34 630 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 CHST12Q9NRB3 414 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 MARCH5Q9NX47 278 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 WRAP73Q9P2S5 460 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 PRG3Q9Y2Y8 225 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 ZDHHC9Q9Y397 364 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 PCDHB2Q9Y5E7 798 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 DOCK8Q8NF50 2099 aa13.09□□□□□ -0.31
CSNK1E-212ENST00000494610 CCDC195A0A1B0GUA6 201 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 EML1O00423 815 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 LRRN2O75325 713 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 BMP15O95972 392 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 DCNP07585 359 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 GBP2P32456 591 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 OTOP3Q7RTS5 596 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 FERMT3Q86UX7 667 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 KIAA2013Q8IYS2 634 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 DCLK2Q8N568 766 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 TBCKQ8TEA7 893 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 RIT2Q99578 217 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 SCAND2PQ9GZW5 306 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 IFT122Q9HBG6 1241 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 MIOSQ9NXC5 875 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 KCNJ14Q9UNX9 436 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 OTOGLQ3ZCN5 2332 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 SPTBN2O15020 2390 aa13.08□□□□□ -0.32
CSNK1E-212ENST00000494610 CACNA1IQ9P0X4 2223 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 POTEMA6NI47 508 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 ZBTB39O15060 712 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 TEX28O15482 410 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 MAFO75444 373 aaPredicted RBP13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 SRGAP2CP0DJJ0 459 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 SFPQP23246 707 aaKnown RBP eCLIP13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 HOXA11P31270 313 aaPredicted RBP13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 JAK3P52333 1124 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 FOXK2Q01167 660 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 BMS1Q14692 1282 aaKnown RBP13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 XKR3Q5GH77 459 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 FOXD4L5Q5VV16 416 aaPredicted RBP13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 B3GNT9Q6UX72 402 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 PALB2Q86YC2 1186 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 GLYCTKQ8IVS8 523 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 SLC44A3Q8N4M1 653 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 GPR152Q8TDT2 470 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 FOXD4L4Q8WXT5 416 aaPredicted RBP13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 TMEM143Q96AN5 459 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 NAP1L4Q99733 375 aaKnown RBP13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 RPP25Q9BUL9 199 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms