RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 TTC3P53804 2025 aa21.51■■□□□ 1.03
SEC22A-209ENST00000491366 LAMA3Q16787 3333 aa21.5■■□□□ 1.03
SEC22A-209ENST00000491366 FRMD3A2A2Y4 597 aa21.5■■□□□ 1.03
SEC22A-209ENST00000491366 TBKBP1A7MCY6 615 aa21.5■■□□□ 1.03
SEC22A-209ENST00000491366 ARHGEF15O94989 841 aa21.5■■□□□ 1.03
SEC22A-209ENST00000491366 BTG3Q14201 252 aaPredicted RBP21.5■■□□□ 1.03
SEC22A-209ENST00000491366 ZC2HC1CQ53FD0 456 aaPredicted RBP21.5■■□□□ 1.03
SEC22A-209ENST00000491366 ZNF598Q86UK7 904 aaKnown RBP21.5■■□□□ 1.03
SEC22A-209ENST00000491366 BICD1Q96G01 975 aa21.5■■□□□ 1.03
SEC22A-209ENST00000491366 TBX20Q9UMR3 447 aa21.5■■□□□ 1.03
SEC22A-209ENST00000491366 HES2Q9Y543 173 aa21.5■■□□□ 1.03
SEC22A-209ENST00000491366 IPPQ9Y573 584 aa21.5■■□□□ 1.03
SEC22A-209ENST00000491366 MEIS3P2A8K0S8 358 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 PRPF40AO75400 957 aaKnown RBP21.49■■□□□ 1.03
SEC22A-209ENST00000491366 EOMESO95936 686 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 FAM160A1Q05DH4 1040 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 ZNF697Q5TEC3 545 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 CNNM4Q6P4Q7 775 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 ABI1Q8IZP0 508 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 FMR1NBQ8N0W7 255 aaPredicted RBP21.49■■□□□ 1.03
SEC22A-209ENST00000491366 SMG8Q8ND04 991 aaKnown RBP21.49■■□□□ 1.03
SEC22A-209ENST00000491366 SLC17A8Q8NDX2 589 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 HELQQ8TDG4 1101 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 HPS3Q969F9 1004 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 ZNF689Q96CS4 500 aaPredicted RBP21.49■■□□□ 1.03
SEC22A-209ENST00000491366 PGBD4Q96DM1 585 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 ACO2Q99798 780 aaKnown RBP21.49■■□□□ 1.03
SEC22A-209ENST00000491366 ADPGKQ9BRR6 497 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 NXF3Q9H4D5 531 aaKnown RBP21.49■■□□□ 1.03
SEC22A-209ENST00000491366 RC3H2Q9HBD1 1191 aaKnown RBP21.49■■□□□ 1.03
SEC22A-209ENST00000491366 RNF19AQ9NV58 838 aa21.49■■□□□ 1.03
SEC22A-209ENST00000491366 LINC01553A4QN01 128 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 HOXA2O43364 376 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 GTPBP6O43824 516 aaPredicted RBP21.48■■□□□ 1.03
SEC22A-209ENST00000491366 ZNF623O75123 536 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 GCNT3O95395 438 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 PRR29P0C7W0 189 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 CLLU1OSQ5K130 101 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 UNC13DQ70J99 1090 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 ZNF720Q7Z2F6 126 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 SPRED2Q7Z698 418 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 ZBTB33Q86T24 672 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 FIBCD1Q8N539 461 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 SP7Q8TDD2 431 aaPredicted RBP21.48■■□□□ 1.03
SEC22A-209ENST00000491366 FAM161BQ96MY7 647 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 TCHPQ9BT92 498 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 FGFBP2Q9BYJ0 223 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 CERS4Q9HA82 394 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 OLFML3Q9NRN5 406 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 ANKFY1Q9P2R3 1169 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 MTUS1Q9ULD2 1270 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 TNFSF13BQ9Y275 285 aa21.48■■□□□ 1.03
SEC22A-209ENST00000491366 MYBP10242 640 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 HARSP12081 509 aaKnown RBP21.47■■□□□ 1.03
SEC22A-209ENST00000491366 ITGA4P13612 1032 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 MATR3P43243 847 aaKnown RBP eCLIP21.47■■□□□ 1.03
SEC22A-209ENST00000491366 CASP5P51878 434 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 GTF2BQ00403 316 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 TAP1Q03518 808 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 SNW1Q13573 536 aaKnown RBP21.47■■□□□ 1.03
SEC22A-209ENST00000491366 ZNF568Q3ZCX4 644 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 Q7L0L9 218 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 MRPL10Q7Z7H8 261 aaKnown RBP21.47■■□□□ 1.03
SEC22A-209ENST00000491366 CMTR2Q8IYT2 770 aaKnown RBP21.47■■□□□ 1.03
SEC22A-209ENST00000491366 ENGASEQ8NFI3 743 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 TMEM117Q9H0C3 514 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 RNF39Q9H2S5 420 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 TTYH1Q9H313 450 aaPredicted RBP21.47■■□□□ 1.03
SEC22A-209ENST00000491366 ZNF576Q9H609 170 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 INPP5FQ9Y2H2 1132 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 LAMA2P24043 3122 aaKnown RBP21.47■■□□□ 1.03
SEC22A-209ENST00000491366 COL4A6Q14031 1691 aa21.47■■□□□ 1.03
SEC22A-209ENST00000491366 HNRNPDLO14979 420 aaKnown RBP21.46■■□□□ 1.03
SEC22A-209ENST00000491366 NR1I2O75469 434 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 SCP2P22307 547 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 LIG4P49917 911 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 DCAF4L1Q3SXM0 396 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 GLB1LQ6UWU2 654 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 AGMOQ6ZNB7 445 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 APBB1IPQ7Z5R6 666 aaPredicted RBP21.46■■□□□ 1.03
SEC22A-209ENST00000491366 HACE1Q8IYU2 909 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 ZBTB45Q96K62 511 aaPredicted RBP21.46■■□□□ 1.03
SEC22A-209ENST00000491366 CASD1Q96PB1 797 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 GBP4Q96PP9 640 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 ST6GALNAC4Q9H4F1 302 aa21.46■■□□□ 1.03
SEC22A-209ENST00000491366 PVALEFA0A1B0GWK0 134 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 AKAP5P24588 427 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 ABCD1P33897 745 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 UBE2HP62256 183 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 FAM26FQ5R3K3 315 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 KANK3Q6NY19 840 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 MPZL3Q6UWV2 235 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 ZPBP2Q6X784 338 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 MAP4K3Q8IVH8 894 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 GLIS3Q8NEA6 775 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 CCDC34Q96HJ3 373 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 CDT1Q9H211 546 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 RSAD1Q9HA92 442 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 PTPRHQ9HD43 1115 aa21.45■■□□□ 1.02
SEC22A-209ENST00000491366 EXOC1Q9NV70 894 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms