RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 HOXA11P31270 313 aaPredicted RBP17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 SCNN1GP51170 649 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 RCAN1P53805 252 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 KIAA0319Q5VV43 1072 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 PHLDB3Q6NSJ2 640 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 ELMSAN1Q6PJG2 1045 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 MRPL10Q7Z7H8 261 aaKnown RBP17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 SKAP1Q86WV1 359 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 COLGALT2Q8IYK4 626 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 RNF168Q8IYW5 571 aaPredicted RBP17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 SUMF1Q8NBK3 374 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 SMG8Q8ND04 991 aaKnown RBP17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 BICD2Q8TD16 824 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 TBCKQ8TEA7 893 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 RABGGTAQ92696 567 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 GAD1Q99259 594 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 APOL6Q9BWW8 343 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 SLC26A6Q9BXS9 759 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 EIF2AQ9BY44 585 aaKnown RBP17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 ANHXE9PGG2 379 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 PRPF3O43395 683 aaKnown RBP17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 DSG1Q02413 1049 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 B3GNT9Q6UX72 402 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 RDM1Q8NG50 284 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 FGF14Q92915 247 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 BRF1Q92994 677 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 NT5C3AQ9H0P0 336 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 RXFP1Q9HBX9 757 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 KANSL3Q9P2N6 904 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 CACNG4Q9UBN1 327 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 IPPQ9Y573 584 aa17.15■□□□□ 0.34
SCAMP3-208ENST00000490999 DOCK8Q8NF50 2099 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 CHD8Q9HCK8 2581 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 CCDC196A0A1B0GTZ2 297 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 ARL5CA6NH57 179 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 KINO60870 393 aaKnown RBP17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 EFEMP2O95967 443 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 ITGA4P13612 1032 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 NCLP19338 710 aaKnown RBP17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 GPC5P78333 572 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 NTHL1P78549 312 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 SNW1Q13573 536 aaKnown RBP17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 PARM1Q6UWI2 310 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 Q6ZUG5 572 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 ETNPPLQ8TBG4 499 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 SLC7A3Q8WY07 619 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 RHOBTB2Q9BYZ6 727 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 SLC2A4RGQ9NR83 387 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 SPATA6Q9NWH7 488 aaPredicted RBP17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 WRAP73Q9P2S5 460 aaPredicted RBP17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 NCDNQ9UBB6 729 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 NID2Q14112 1375 aa17.14■□□□□ 0.33
SCAMP3-208ENST00000490999 EML1O00423 815 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 USP11P51784 963 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 PSMC5P62195 406 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 DSC1Q08554 894 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 LAMTOR4Q0VGL1 99 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 Q4G0T1 1027 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 CYP26C1Q6V0L0 522 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 PSPC1Q8WXF1 523 aaKnown RBP17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 NXPE3Q969Y0 559 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 CPB2Q96IY4 423 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 GPR62Q9BZJ7 368 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 NCOA5Q9HCD5 579 aaKnown RBP17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 MIOSQ9NXC5 875 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 DPP7Q9UHL4 492 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 SSX2IPQ9Y2D8 614 aa17.13■□□□□ 0.33
SCAMP3-208ENST00000490999 SLC37A4O43826 429 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 GAS2O43903 313 aaKnown RBP17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 TSPAN1O60635 241 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 FSHRP23945 695 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 NLRP5P59047 1200 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 UBXN2BQ14CS0 331 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 FUT10Q6P4F1 479 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 PRSS55Q6UWB4 352 aaPredicted RBP17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 GRASPQ7Z6J2 395 aaPredicted RBP17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 RNF149Q8NC42 400 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 CEP170P1Q96L14 293 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 JPH2Q9BR39 696 aaPredicted RBP17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 PRKD2Q9BZL6 878 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 NXF3Q9H4D5 531 aaKnown RBP17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 ZDHHC7Q9NXF8 308 aa17.12■□□□□ 0.33
SCAMP3-208ENST00000490999 ERLIN2O94905 339 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 CD72P21854 359 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 STARD6P59095 220 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 EMC2Q15006 297 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 NTRK3Q16288 839 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 SRGAP1Q7Z6B7 1085 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 HASPINQ8TF76 798 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 JAKMIP1Q96N16 626 aaKnown RBP17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 KXD1Q9BQD3 176 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 PLEKHA4Q9H4M7 779 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 CHST7Q9NS84 486 aa17.11■□□□□ 0.33
SCAMP3-208ENST00000490999 CFAP47Q6ZTR5 3102 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms