RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	SLC1A1	P43005	524 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	KLK7	P49862	253 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	EFNA5	P52803	228 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	NCKAP1L	P55160	1127 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	LMNB2	Q03252	620 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	CXCL9	Q07325	125 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	STRN3	Q13033	797 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	DRAP1	Q14919	205 aa	Predicted RBP	6.85	□□□□□ -1.31
FN1-223	ENST00000490833	XKR3	Q5GH77	459 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	MSL1	Q68DK7	614 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	C11orf63	Q6NUN7	778 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	LIAT1	Q6ZQX7	453 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	B4GALNT4	Q76KP1	1039 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	HAUS6	Q7Z4H7	955 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	DAAM2	Q86T65	1068 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	CLEC10A	Q8IUN9	316 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	SCYL3	Q8IZE3	742 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	ANKRD35	Q8N283	1001 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	RASGEF1C	Q8N431	466 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	NOA1	Q8NC60	698 aa	Known RBP	6.85	□□□□□ -1.31
FN1-223	ENST00000490833	BBOF1	Q8ND07	529 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	TPCN2	Q8NHX9	752 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	SLC30A5	Q8TAD4	765 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	ACER1	Q8TDN7	264 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.85	□□□□□ -1.31
FN1-223	ENST00000490833	PIGO	Q8TEQ8	1089 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	GJA10	Q969M2	543 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	EEF2KMT	Q96G04	330 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	FAM167A	Q96KS9	214 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	TRERF1	Q96PN7	1200 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	RUSC1	Q9BVN2	902 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	TEX13B	Q9BXU2	312 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	DNAI2	Q9GZS0	605 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	INTS2	Q9H0H0	1204 aa	Known RBP	6.85	□□□□□ -1.31
FN1-223	ENST00000490833	TAF1D	Q9H5J8	278 aa	Predicted RBP	6.85	□□□□□ -1.31
FN1-223	ENST00000490833	TMEM8A	Q9HCN3	771 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	GOLGA6A	Q9NYA3	693 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	VPS18	Q9P253	973 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	TMEM59L	Q9UK28	342 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	HPCAL4	Q9UM19	191 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	COQ4	Q9Y3A0	265 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	ZHX2	Q9Y6X8	837 aa		6.85	□□□□□ -1.31
FN1-223	ENST00000490833	NCAN	O14594	1321 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	IGSF9B	Q9UPX0	1349 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	CLRN2	A0PK11	232 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	UNCX	A6NJT0	531 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	ZNF233	A6NK53	670 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	KRIT1	O00522	736 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	VWA5A	O00534	786 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	POLR3G	O15318	223 aa	Predicted RBP	6.84	□□□□□ -1.31
FN1-223	ENST00000490833	CHMP2A	O43633	222 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	ZEB2	O60315	1214 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	TLR2	O60603	784 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	SASH3	O75995	380 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	SEC31A	O94979	1220 aa	Known RBP	6.84	□□□□□ -1.31
FN1-223	ENST00000490833	HOXC6	P09630	235 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	AR	P10275	920 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	ITGB5	P18084	799 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	SLC9A1	P19634	815 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	TBXAS1	P24557	533 aa	Predicted RBP	6.84	□□□□□ -1.31
FN1-223	ENST00000490833	KLRC1	P26715	233 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	ATP5D	P30049	168 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	CHRNA3	P32297	505 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	ICAM3	P32942	547 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	SLC26A2	P50443	739 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	MXI1	P50539	228 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	GPC3	P51654	580 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	YWHAE	P62258	255 aa	Known RBP	6.84	□□□□□ -1.31
FN1-223	ENST00000490833	RPS6	P62753	249 aa	Known RBP	6.84	□□□□□ -1.31
FN1-223	ENST00000490833	PRR20E	P86478	221 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	PRR20C	P86479	221 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	PRR20D	P86480	221 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	PRR20B	P86481	221 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	PRR20A	P86496	221 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	GCNT1	Q02742	428 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	CAV1	Q03135	178 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	ARID5A	Q03989	594 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	RAD51AP2	Q09MP3	1159 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	GRM1	Q13255	1194 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	NEDD9	Q14511	834 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	SLMAP	Q14BN4	828 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	PGM5	Q15124	567 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	STXBP2	Q15833	593 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	KYAT1	Q16773	422 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	PUS10	Q3MIT2	529 aa	Known RBP	6.84	□□□□□ -1.31
FN1-223	ENST00000490833	XKR9	Q5GH70	373 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	NOL9	Q5SY16	702 aa	Known RBP	6.84	□□□□□ -1.31
FN1-223	ENST00000490833	FAM160B1	Q5W0V3	765 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	ZNF571	Q7Z3V5	609 aa	Predicted RBP	6.84	□□□□□ -1.31
FN1-223	ENST00000490833	MAP4K3	Q8IVH8	894 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	TTC39C	Q8N584	583 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	LRRC57	Q8N9N7	239 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	FBXL13	Q8NEE6	735 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	CCHCR1	Q8TD31	782 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	GRK7	Q8WTQ7	553 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	SCFD2	Q8WU76	684 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6.84	□□□□□ -1.31
FN1-223	ENST00000490833	TCP11	Q8WWU5	503 aa		6.84	□□□□□ -1.31
FN1-223	ENST00000490833	CLEC4D	Q8WXI8	215 aa		6.84	□□□□□ -1.31

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