RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 POSTNQ15063 836 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 DCAF4L1Q3SXM0 396 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 HABP4Q5JVS0 413 aaKnown RBP11.94□□□□□ -0.5
VPS13D-210ENST00000489961 FAM26FQ5R3K3 315 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 UBXN11Q5T124 520 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 NT5DC1Q5TFE4 455 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 FAM109BQ6ICB4 259 aaPredicted RBP11.94□□□□□ -0.5
VPS13D-210ENST00000489961 ZPBP2Q6X784 338 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
VPS13D-210ENST00000489961 RNF169Q8NCN4 708 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 YME1L1Q96TA2 773 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 RAD9AQ99638 391 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 ACO2Q99798 780 aaKnown RBP11.94□□□□□ -0.5
VPS13D-210ENST00000489961 TARS2Q9BW92 718 aaKnown RBP11.94□□□□□ -0.5
VPS13D-210ENST00000489961 PDZD7Q9H5P4 517 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 EXOC1Q9NV70 894 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 EXOC7Q9UPT5 735 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 TNFSF13BQ9Y275 285 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 INSL6Q9Y581 213 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 PCDHB2Q9Y5E7 798 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 PCDHA11Q9Y5I1 949 aa11.94□□□□□ -0.5
VPS13D-210ENST00000489961 TTLL13PA6NNM8 815 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 HNRNPDLO14979 420 aaKnown RBP11.93□□□□□ -0.5
VPS13D-210ENST00000489961 NPTXRO95502 500 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
VPS13D-210ENST00000489961 EDN1P05305 212 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 PRR29P0C7W0 189 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 LIG4P49917 911 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 HTRA4P83105 476 aaPredicted RBP11.93□□□□□ -0.5
VPS13D-210ENST00000489961 DPYDQ12882 1025 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 PSMD2Q13200 908 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 ZNF568Q3ZCX4 644 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 KMT5BQ4FZB7 885 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 ZC2HC1CQ53FD0 456 aaPredicted RBP11.93□□□□□ -0.5
VPS13D-210ENST00000489961 L1TD1Q5T7N2 865 aaKnown RBP11.93□□□□□ -0.5
VPS13D-210ENST00000489961 CDR2LQ86X02 465 aaPredicted RBP11.93□□□□□ -0.5
VPS13D-210ENST00000489961 MAP4K3Q8IVH8 894 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 ELOA2Q8IYF1 753 aaPredicted RBP11.93□□□□□ -0.5
VPS13D-210ENST00000489961 ACCSQ96QU6 501 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 TCHPQ9BT92 498 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 EIF2AQ9BY44 585 aaKnown RBP11.93□□□□□ -0.5
VPS13D-210ENST00000489961 PBX4Q9BYU1 374 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 USP20Q9Y2K6 914 aa11.93□□□□□ -0.5
VPS13D-210ENST00000489961 EIF3DO15371 548 aaKnown RBP eCLIP11.92□□□□□ -0.5
VPS13D-210ENST00000489961 KLRC4O43908 158 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 TOM1L1O75674 476 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 PPP1R37O75864 691 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 DGKIO75912 1065 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 SMC2O95347 1197 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 PIGRP01833 764 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 MYBP10242 640 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 ITGA4P13612 1032 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 ATF7P17544 494 aaPredicted RBP11.92□□□□□ -0.5
VPS13D-210ENST00000489961 DNAJB2P25686 324 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 MATR3P43243 847 aaKnown RBP eCLIP11.92□□□□□ -0.5
VPS13D-210ENST00000489961 EHHADHQ08426 723 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 EEF1DP3Q658K8 133 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 MPZL3Q6UWV2 235 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 MRPL10Q7Z7H8 261 aaKnown RBP11.92□□□□□ -0.5
VPS13D-210ENST00000489961 ZNF598Q86UK7 904 aaKnown RBP11.92□□□□□ -0.5
VPS13D-210ENST00000489961 ABI1Q8IZP0 508 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 SYCP3Q8IZU3 236 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 CRIPAKQ8N1N5 446 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 RSPH1Q8WYR4 309 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 HPS3Q969F9 1004 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 STRA6Q9BX79 667 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 TMEM206Q9H813 350 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 UBN1Q9NPG3 1134 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 LMBRD1Q9NUN5 540 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 RMND1Q9NWS8 449 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 ANKFY1Q9P2R3 1169 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 IPPQ9Y573 584 aa11.92□□□□□ -0.5
VPS13D-210ENST00000489961 FNDC1Q4ZHG4 1894 aaPredicted RBP11.91□□□□□ -0.5
VPS13D-210ENST00000489961 UBE4BO95155 1302 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 COL4A6Q14031 1691 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 TBKBP1A7MCY6 615 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 CLDN3O15551 220 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 PRPF6O94906 941 aaKnown RBP11.91□□□□□ -0.5
VPS13D-210ENST00000489961 RHOBTB3O94955 611 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 MCF2P10911 925 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 FGFR1P11362 822 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 PROZP22891 400 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 PBX2P40425 430 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 CASP5P51878 434 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 PNOCQ13519 176 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 BTG3Q14201 252 aaPredicted RBP11.91□□□□□ -0.5
VPS13D-210ENST00000489961 KCNB1Q14721 858 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 NOLC1Q14978 699 aaKnown RBP eCLIP11.91□□□□□ -0.5
VPS13D-210ENST00000489961 GLB1LQ6UWU2 654 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 ZBTB33Q86T24 672 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 CMTR2Q8IYT2 770 aaKnown RBP11.91□□□□□ -0.5
VPS13D-210ENST00000489961 SMG8Q8ND04 991 aaKnown RBP11.91□□□□□ -0.5
VPS13D-210ENST00000489961 LPPQ93052 612 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 SMARCE1Q969G3 411 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 TIFAQ96CG3 184 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 ZNF689Q96CS4 500 aaPredicted RBP11.91□□□□□ -0.5
VPS13D-210ENST00000489961 APOL6Q9BWW8 343 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 FGFBP2Q9BYJ0 223 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 TMEM117Q9H0C3 514 aa11.91□□□□□ -0.5
VPS13D-210ENST00000489961 CDT1Q9H211 546 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms