RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 DAB2IPQ5VWQ8 1189 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 ELMSAN1Q6PJG2 1045 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 Q6ZS52 159 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 NLRX1Q86UT6 975 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 WDR5BQ86VZ2 330 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 DGKHQ86XP1 1220 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 GPRASP2Q96D09 838 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 CRELD1Q96HD1 420 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 ZNF668Q96K58 619 aaPredicted RBP8.3□□□□□ -1.08
COL9A1-209ENST00000489861 RWDD1Q9H446 243 aaPredicted RBP8.3□□□□□ -1.08
COL9A1-209ENST00000489861 AZI2Q9H6S1 392 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 VPS45Q9NRW7 570 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 RBM12Q9NTZ6 932 aaKnown RBP8.3□□□□□ -1.08
COL9A1-209ENST00000489861 INPP5FQ9Y2H2 1132 aa8.3□□□□□ -1.08
COL9A1-209ENST00000489861 NOTCH2Q04721 2471 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 ABCA12Q86UK0 2595 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 TDRD15B5MCY1 1934 aaKnown RBP8.29□□□□□ -1.08
COL9A1-209ENST00000489861 LNP1A1A4G5 178 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 MAN2B1O00754 1011 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 NRG2O14511 850 aaPredicted RBP8.29□□□□□ -1.08
COL9A1-209ENST00000489861 CDX4O14627 284 aaPredicted RBP8.29□□□□□ -1.08
COL9A1-209ENST00000489861 OFD1O75665 1012 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 C22orf31O95567 290 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 FGAP02671 866 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 URODP06132 367 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 NLRP11P59045 1033 aaKnown RBP8.29□□□□□ -1.08
COL9A1-209ENST00000489861 HAND2P61296 217 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 FGD1P98174 961 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 RNASELQ05823 741 aaKnown RBP8.29□□□□□ -1.08
COL9A1-209ENST00000489861 TRAF1Q13077 416 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 HDAC1Q13547 482 aaPredicted RBP8.29□□□□□ -1.08
COL9A1-209ENST00000489861 ALX1Q15699 326 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 NOMO2Q5JPE7 1267 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 ANKRD45Q5TZF3 282 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 TANGO2Q6ICL3 276 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 CACNA2D4Q7Z3S7 1137 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 IQCA1Q86XH1 822 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 HOMER1Q86YM7 354 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 TBC1D10CQ8IV04 446 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 NPAS3Q8IXF0 933 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 RNF168Q8IYW5 571 aaPredicted RBP8.29□□□□□ -1.08
COL9A1-209ENST00000489861 GAB3Q8WWW8 586 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 FAM3CQ92520 227 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 MKNK1Q9BUB5 465 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 HERC2P3Q9BVR0 1158 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 MARCH5Q9NX47 278 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 PCDHGA5Q9Y5G8 931 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 KIF26AQ9ULI4 1882 aaPredicted RBP8.29□□□□□ -1.08
COL9A1-209ENST00000489861 VWA8A3KMH1 1905 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 ADAMTS9Q9P2N4 1935 aa8.29□□□□□ -1.08
COL9A1-209ENST00000489861 KNTC1P50748 2209 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 SPAARA0A1B0GVQ0 90 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 CARNS1A5YM72 827 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 KLRF2D3W0D1 207 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 NRP1O14786 923 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 ARHGAP6O43182 974 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 HBP1O60381 514 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 ECI2O75521 394 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 CSDE1O75534 798 aaKnown RBP8.28□□□□□ -1.08
COL9A1-209ENST00000489861 RPP40O75818 363 aaKnown RBP8.28□□□□□ -1.08
COL9A1-209ENST00000489861 RPL17P18621 184 aaKnown RBP8.28□□□□□ -1.08
COL9A1-209ENST00000489861 HOXA6P31267 233 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 PHKA2P46019 1235 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 PXNP49023 591 aaPredicted RBP8.28□□□□□ -1.08
COL9A1-209ENST00000489861 GLUD2P49448 558 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 ACTR2P61160 394 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 PTGDRQ13258 359 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 GRM2Q14416 872 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 MCMDC2Q4G0Z9 681 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 USP17L6PQ6QN14 398 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 ZNF605Q86T29 641 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 CHCHD4Q8N4Q1 142 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 PI4K2BQ8TCG2 481 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 ING5Q8WYH8 240 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 PIK3R5Q8WYR1 880 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 SLC39A7Q92504 469 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 DNASE1L2Q92874 299 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 TNPO1Q92973 898 aaKnown RBP8.28□□□□□ -1.08
COL9A1-209ENST00000489861 B3GALT6Q96L58 329 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 PIGSQ96S52 555 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 KAT14Q9H8E8 782 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 JPH1Q9HDC5 661 aaPredicted RBP8.28□□□□□ -1.08
COL9A1-209ENST00000489861 SLC9A2Q9UBY0 812 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 FAN1Q9Y2M0 1017 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 RAXQ9Y2V3 346 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 NEDD4P46934 1319 aa8.28□□□□□ -1.08
COL9A1-209ENST00000489861 MGAQ8IWI9 3026 aa8.27□□□□□ -1.08
COL9A1-209ENST00000489861 COL1A2P08123 1366 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 B4E1Z4 1266 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 F8W810 466 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 ALDH2P05091 517 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 ATP4AP20648 1035 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 EIF4BP23588 611 aaKnown RBP8.27□□□□□ -1.09
COL9A1-209ENST00000489861 CCNE1P24864 410 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 CLCN3P51790 818 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 DSG1Q02413 1049 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 GLB1LQ6UWU2 654 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 MFSD6Q6ZSS7 791 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 ZNF843Q8N446 348 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms