RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 XKR9Q5GH70 373 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 TMC5Q6UXY8 1006 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
ACTN4-206ENST00000489451 COLGALT2Q8IYK4 626 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
ACTN4-206ENST00000489451 CPB2Q96IY4 423 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 RIPOR3Q96MK2 946 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 NECTIN4Q96NY8 510 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 KLHL5Q96PQ7 755 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 HSD17B14Q9BPX1 270 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 HES2Q9Y543 173 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 IPPQ9Y573 584 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 RIF1Q5UIP0 2472 aaKnown RBP13.12□□□□□ -0.31
ACTN4-206ENST00000489451 ZFHX4Q86UP3 3567 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 DMDP11532 3685 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 A0A087WWV3 80 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 JAK2O60674 1132 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 LYPLA2O95372 231 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 SSBP05455 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
ACTN4-206ENST00000489451 ARL2P36404 184 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 MTHFRP42898 656 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 RNASELQ05823 741 aaKnown RBP13.11□□□□□ -0.31
ACTN4-206ENST00000489451 MBTD1Q05BQ5 628 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 DSC1Q08554 894 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 CAPSQ13938 189 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 CES5AQ6NT32 575 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 GSTCDQ8NEC7 633 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 GTF3C6Q969F1 213 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 RMDN1Q96DB5 314 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 PGBD4Q96DM1 585 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 ZFP42Q96MM3 310 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 MTRQ99707 1265 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 EIF2AK1Q9BQI3 630 aaKnown RBP13.11□□□□□ -0.31
ACTN4-206ENST00000489451 TMEM175Q9BSA9 504 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 ZSWIM4Q9H7M6 989 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 DZANK1Q9NVP4 752 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 SORCS3Q9UPU3 1222 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 NR2E1Q9Y466 385 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 CNTNAP2Q9UHC6 1331 aa13.11□□□□□ -0.31
ACTN4-206ENST00000489451 DOCK8Q8NF50 2099 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 B4GALT5O43286 388 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
ACTN4-206ENST00000489451 GAS2O43903 313 aaKnown RBP13.1□□□□□ -0.31
ACTN4-206ENST00000489451 DKC1O60832 514 aaKnown RBP eCLIP13.1□□□□□ -0.31
ACTN4-206ENST00000489451 N4BP1O75113 896 aaKnown RBP13.1□□□□□ -0.31
ACTN4-206ENST00000489451 GLRA2P23416 452 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 KRT2P35908 639 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 MLH1P40692 756 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 RARRES1P49788 294 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 NUBP1P53384 320 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 COL9A2Q14055 689 aaPredicted RBP13.1□□□□□ -0.31
ACTN4-206ENST00000489451 GIT2Q14161 759 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 GPR149Q86SP6 731 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 TPH2Q8IWU9 490 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 ZDHHC14Q8IZN3 488 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 TMEM105Q8N8V8 129 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 URGCPQ8TCY9 931 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 MTMR9Q96QG7 549 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 GAD1Q99259 594 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 HERC2P3Q9BVR0 1158 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 TMEM60Q9H2L4 133 aa13.1□□□□□ -0.31
ACTN4-206ENST00000489451 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
ACTN4-206ENST00000489451 ARL5CA6NH57 179 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 POTEMA6NI47 508 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 SOD2P04179 222 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 ARF4P18085 180 aaPredicted RBP13.09□□□□□ -0.31
ACTN4-206ENST00000489451 SCNN1GP51170 649 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 FOSBP53539 338 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 ANAPC15P60006 121 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 MTMR3Q13615 1198 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 POTEGQ6S5H5 508 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 OTUD6AQ7L8S5 288 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 CABP7Q86V35 215 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 CDR2LQ86X02 465 aaPredicted RBP13.09□□□□□ -0.31
ACTN4-206ENST00000489451 SLFN12Q8IYM2 578 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 TDRD5Q8NAT2 981 aaKnown RBP13.09□□□□□ -0.31
ACTN4-206ENST00000489451 TCP11Q8WWU5 503 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 CSRNP2Q9H175 543 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 NXF3Q9H4D5 531 aaKnown RBP13.09□□□□□ -0.31
ACTN4-206ENST00000489451 SFXN1Q9H9B4 322 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 CACNG4Q9UBN1 327 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 LIMD1Q9UGP4 676 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
ACTN4-206ENST00000489451 USTQ9Y2C2 406 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
ACTN4-206ENST00000489451 MTCL1Q9Y4B5 1905 aaKnown RBP13.09□□□□□ -0.31
ACTN4-206ENST00000489451 DOCK6Q96HP0 2047 aa13.08□□□□□ -0.31
ACTN4-206ENST00000489451 CARNS1A5YM72 827 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 TTLL13PA6NNM8 815 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 C2CD2LO14523 706 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 TEX28O15482 410 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 ASAP2O43150 1006 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 ALDH2P05091 517 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 SPATA31C1P0DKV0 1188 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 ITGA4P13612 1032 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 XBP1P17861 261 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 POU5F1BQ06416 359 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 CALCRLQ16602 461 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms