RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-222ENST00000483882 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 FSIP1Q8NA03 581 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 RNF169Q8NCN4 708 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 PRPF31Q8WWY3 499 aaKnown RBP16.5■□□□□ 0.23
NR1H3-222ENST00000483882 BSNDQ8WZ55 320 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 DHX58Q96C10 678 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 TMEM117Q9H0C3 514 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 SUCLA2Q9P2R7 463 aaPredicted RBP16.5■□□□□ 0.23
NR1H3-222ENST00000483882 KCNH3Q9ULD8 1083 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 TCHHQ07283 1943 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 EVPLQ92817 2033 aa16.5■□□□□ 0.23
NR1H3-222ENST00000483882 HOXA2O43364 376 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 GLP2RO95838 553 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 SSBP05455 408 aaKnown RBP eCLIP16.49■□□□□ 0.23
NR1H3-222ENST00000483882 EIF4BP23588 611 aaKnown RBP16.49■□□□□ 0.23
NR1H3-222ENST00000483882 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
NR1H3-222ENST00000483882 GPC3P51654 580 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 ERVFC1P60507 584 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 COASYQ13057 564 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 ABI1Q8IZP0 508 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 SMRP1Q8NCR6 262 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 LARP4BQ92615 738 aaKnown RBP16.49■□□□□ 0.23
NR1H3-222ENST00000483882 JPH2Q9BR39 696 aaPredicted RBP16.49■□□□□ 0.23
NR1H3-222ENST00000483882 CWH43Q9H720 699 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 PLXNA4Q9HCM2 1894 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 FAM13BQ9NYF5 915 aa16.49■□□□□ 0.23
NR1H3-222ENST00000483882 FNDC1Q4ZHG4 1894 aaPredicted RBP16.48■□□□□ 0.23
NR1H3-222ENST00000483882 MYMKA6NI61 221 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 ACTN4O43707 911 aaKnown RBP16.48■□□□□ 0.23
NR1H3-222ENST00000483882 GAS2O43903 313 aaKnown RBP16.48■□□□□ 0.23
NR1H3-222ENST00000483882 GLRA2P23416 452 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 GUCY2CP25092 1073 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 STAT6P42226 847 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 RBM10P98175 930 aaKnown RBP16.48■□□□□ 0.23
NR1H3-222ENST00000483882 RAD51AP2Q09MP3 1159 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 LAMTOR4Q0VGL1 99 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 DUSP6Q16828 381 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 PLPP4Q5VZY2 271 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 GPBP1Q86WP2 473 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 RHPN2Q8IUC4 686 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 EXOC8Q8IYI6 725 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 TCP11Q8WWU5 503 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 NLRP7Q8WX94 980 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
NR1H3-222ENST00000483882 STAMQ92783 540 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 CCDC43Q96MW1 224 aaKnown RBP16.48■□□□□ 0.23
NR1H3-222ENST00000483882 CASD1Q96PB1 797 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 POLR3FQ9H1D9 316 aaPredicted RBP16.48■□□□□ 0.23
NR1H3-222ENST00000483882 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
NR1H3-222ENST00000483882 PUF60Q9UHX1 559 aaKnown RBP16.48■□□□□ 0.23
NR1H3-222ENST00000483882 USP15Q9Y4E8 981 aaPredicted RBP16.48■□□□□ 0.23
NR1H3-222ENST00000483882 FSCN2O14926 492 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 HIP1RO75146 1068 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 FGFR4P22455 802 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 DNM2P50570 870 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
NR1H3-222ENST00000483882 GIT2Q14161 759 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 LONRF3Q496Y0 759 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 HERC4Q5GLZ8 1057 aaPredicted RBP16.47■□□□□ 0.23
NR1H3-222ENST00000483882 PDE12Q6L8Q7 609 aaKnown RBP16.47■□□□□ 0.23
NR1H3-222ENST00000483882 LRRC55Q6ZSA7 311 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 ECHDC2Q86YB7 292 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 ZNF710Q8N1W2 664 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 LRRC43Q8N309 656 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 IQUBQ8NA54 791 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 PSPC1Q8WXF1 523 aaKnown RBP16.47■□□□□ 0.23
NR1H3-222ENST00000483882 ZNF558Q96NG5 402 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 CDCA3Q99618 268 aaPredicted RBP16.47■□□□□ 0.23
NR1H3-222ENST00000483882 TCF25Q9BQ70 676 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 ENTPD7Q9NQZ7 604 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 RNF19AQ9NV58 838 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 KBTBD4Q9NVX7 518 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 COL4A3BPQ9Y5P4 624 aa16.47■□□□□ 0.23
NR1H3-222ENST00000483882 A0A087WZ62 844 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 SFI1A8K8P3 1242 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 CSDE1O75534 798 aaKnown RBP16.46■□□□□ 0.23
NR1H3-222ENST00000483882 DARSP14868 501 aaKnown RBP16.46■□□□□ 0.23
NR1H3-222ENST00000483882 LIG1P18858 919 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 PBX3P40426 434 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 SNW1Q13573 536 aaKnown RBP16.46■□□□□ 0.23
NR1H3-222ENST00000483882 CAPSQ13938 189 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 KCNT2Q6UVM3 1135 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 HFE2Q6ZVN8 426 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 SV2BQ7L1I2 683 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 FMR1NBQ8N0W7 255 aaPredicted RBP16.46■□□□□ 0.23
NR1H3-222ENST00000483882 VN1R2Q8NFZ6 395 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 DNAJC19Q96DA6 116 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 REEP2Q9BRK0 252 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 FDXACB1Q9BRP7 624 aaPredicted RBP16.46■□□□□ 0.23
NR1H3-222ENST00000483882 LZTS1Q9Y250 596 aa16.46■□□□□ 0.23
NR1H3-222ENST00000483882 FSD2A1L4K1 749 aa16.45■□□□□ 0.22
NR1H3-222ENST00000483882 PRPF40AO75400 957 aaKnown RBP16.45■□□□□ 0.22
NR1H3-222ENST00000483882 SLFN14P0C7P3 912 aa16.45■□□□□ 0.22
NR1H3-222ENST00000483882 SRGAP2CP0DJJ0 459 aa16.45■□□□□ 0.22
NR1H3-222ENST00000483882 SRGAP2BP0DMP2 458 aa16.45■□□□□ 0.22
NR1H3-222ENST00000483882 CASP1P29466 404 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms